Cba_g67854 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0007121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g67854

Target Alias Description ECC score Gene Family Method Actions
Ala_g09520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30417 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11390 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28759 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31155 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50360 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37999 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027179 No alias not classified & original description: CDS=1-996 0.03 OrthoFinder output from all 47 species
Spa_g52179 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41050 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 361 381
IPR002885 Pentatricopeptide_repeat 172 218
IPR002885 Pentatricopeptide_repeat 272 319
IPR002885 Pentatricopeptide_repeat 387 433
No external refs found!