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  5. Cba_g67782

Cba_g67782 (RAD23A)


Aliases : RAD23A

Description : ubiquitin-proteasome shuttle factor *(RAD23) & original description: none


Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g67782

Target Alias Description ECC score Gene Family Method Actions
Adi_g058727 RAD23A ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g08300.1 RAD23B, RAD23,... shuttle protein (RAD23) 0.02 OrthoFinder output from all 47 species
Mp1g26290.1 RAD23B, RAD23 shuttle protein (RAD23) 0.02 OrthoFinder output from all 47 species
Ore_g27319 RAD23-3, RAD23C ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Smo77427 RAD23B, RAD23 Ubiquitin receptor RAD23b OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g08949 RAD23-3, RAD23C ubiquiTin-proteasome shuttle factor *(RAD23) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 76
IPR015940 UBA 153 191
No external refs found!