Cba_g67733


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g67733

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00217860 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Adi_g016117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016795 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021159 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033460 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17656 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32066 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55219 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04187 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08251 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28718 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68104 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09925.t1 Aspi01Gene09925 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038295 No alias not classified & original description: CDS=1-2334 0.04 OrthoFinder output from all 47 species
Azfi_s0125.g048537 No alias not classified & original description: CDS=1-2229 0.03 OrthoFinder output from all 47 species
Cba_g05330 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G018600.1 Ceric.01G018600 not classified & original description: pacid=50592052... 0.03 OrthoFinder output from all 47 species
Ceric.06G062800.1 Ceric.06G062800 not classified & original description: pacid=50620833... 0.03 OrthoFinder output from all 47 species
Ceric.10G046000.1 CRR22, Ceric.10G046000 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G085300.1 Ceric.11G085300 not classified & original description: pacid=50596385... 0.04 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.1Z079200.1 CRR22, Ceric.1Z079200 not classified & original description: pacid=50582193... 0.03 OrthoFinder output from all 47 species
Ceric.20G040800.1 OTP86, Ceric.20G040800 not classified & original description: pacid=50566943... 0.03 OrthoFinder output from all 47 species
Ceric.25G036300.1 Ceric.25G036300 not classified & original description: pacid=50594016... 0.03 OrthoFinder output from all 47 species
Ceric.29G070800.1 Ceric.29G070800 not classified & original description: pacid=50625555... 0.02 OrthoFinder output from all 47 species
Dcu_g21471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37678 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
GSVIVT01036207001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Len_g13067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_23144g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Msp_g22779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22615 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30635 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024419 No alias not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Sam_g26606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo79052 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Spa_g19364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 135 157
IPR002885 Pentatricopeptide_repeat 161 208
IPR002885 Pentatricopeptide_repeat 58 105
No external refs found!