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  5. Cba_g62706

Cba_g62706 (PAP(IV), nPAP)


Aliases : PAP(IV), nPAP

Description : poly(A) RNA polymerase & original description: none


Gene families : OG0000731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000731_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cba_g62706

Target Alias Description ECC score Gene Family Method Actions
AT2G25850 PAPS2 poly(A) polymerase 2 0.03 OrthoFinder output from all 47 species
Aev_g30704 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01167.t1 PAP(IV), nPAP,... poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28614.t2 PAP(IV), nPAP,... poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28614.t3 PAP(IV), nPAP,... poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1970.g108402 PAPS2 poly(A) RNA polymerase & original description: CDS=1131-1580 0.03 OrthoFinder output from all 47 species
Ehy_g01604 PAPS1 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016969001 PAP(IV), nPAP RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Mp7g10140.1 PAPS1 poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Msp_g13197 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27060 No alias poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Smo169728 PAPS1 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.02 OrthoFinder output from all 47 species
Zm00001e037202_P005 PAP(IV), nPAP,... poly(A) RNA polymerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEA Interproscan
BP GO:0043631 RNA polyadenylation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 79 164
IPR007010 PolA_pol_RNA-bd_dom 358 414
IPR007012 PolA_pol_cen_dom 11 354
No external refs found!