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  5. Cba_g62492

Cba_g62492 (MAC3B)


Aliases : MAC3B

Description : E3 ubiquitin protein ligase *(PUB60) & original description: none


Gene families : OG0002806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g62492

Target Alias Description ECC score Gene Family Method Actions
AT2G33340 MAC3B MOS4-associated complex 3B 0.05 OrthoFinder output from all 47 species
Als_g15635 MAC3B E3 ubiquitin protein ligase *(PUB60) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56991 MAC3A E3 ubiquitin protein ligase *(PUB60) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G040200.1 MAC3A, Ceric.06G040200 E3 ubiquitin protein ligase *(PUB60) & original... 0.04 OrthoFinder output from all 47 species
Cre02.g073650 MAC3B RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Mp4g08560.1 MAC3A component MAC3 of non-snRNP MOS4-associated complex 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017747 MAC3B E3 ubiquitin protein ligase *(PUB60) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0429.g027376 MAC3B E3 ubiquitin protein ligase *(PUB60) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 256 292
IPR013915 Pre-mRNA_splic_Prp19 66 130
No external refs found!