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  5. Cba_g60603

Cba_g60603 (SPL2)


Aliases : SPL2

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g60603

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00217130 SPL2,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Adi_g011545 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058412 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38965 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25947 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13089 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24833.t1 SPL2, Aspi01Gene24833 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27773.t1 SPL3, Aspi01Gene27773 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47643.t1 SPL3, Aspi01Gene47643 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001662 SPL7, ATSPL7 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031491 SPL15 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0213.g058306 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s1820.g107212 No alias not classified & original description: CDS=1-336 0.04 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cre16.g692500 AtSPL9, SPL9 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Dcu_g48516 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03805 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03904 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08586 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19323 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g04680.1 SPL2, LOC_Os02g04680 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
MA_10429891g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06307 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60401 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024379 SPL8 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0337.g027280 SPL5 SBP-type transcription factor & original description: CDS=1-1188 0.03 OrthoFinder output from all 47 species
Sam_g14898 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30123 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g015510.3.1 SPL2, Solyc05g015510 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Spa_g15612 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10032 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13303 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 149 222
No external refs found!