Gb_03798


Description : RNA helicase (Prp5)


Gene families : OG_01_0005527 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005527_tree ,
OG_02_0005768 (LandPlants) Phylogenetic Tree(s): OG_02_0005768_tree ,
OG_03_0007757 (SeedPlants) Phylogenetic Tree(s): OG_03_0007757_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03798
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000204.43 No alias RNA processing.RNA splicing.spliceosome... 0.02 Archaeplastida
Cre16.g676400 No alias RNA processing.RNA splicing.spliceosome... 0.01 Archaeplastida
GSVIVT01023849001 No alias DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana 0.05 Archaeplastida
Mp1g06750.1 No alias RNA helicase (Prp5) 0.02 Archaeplastida
Solyc12g098700.1.1 No alias RNA helicase (Prp5) 0.05 Archaeplastida
Zm00001e040204_P001 No alias RNA helicase (Prp5) 0.05 Archaeplastida
GSVIVT01023849001 No alias DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana 0.05 LandPlants
Mp1g06750.1 No alias RNA helicase (Prp5) 0.02 LandPlants
Solyc12g098700.1.1 No alias RNA helicase (Prp5) 0.05 LandPlants
Zm00001e040204_P001 No alias RNA helicase (Prp5) 0.05 LandPlants
Solyc12g098700.1.1 No alias RNA helicase (Prp5) 0.05 SeedPlants
Zm00001e040204_P001 No alias RNA helicase (Prp5) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 771 879
IPR011545 DEAD/DEAH_box_helicase_dom 562 733
No external refs found!