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  5. Lfl_g36700

Lfl_g36700 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0011810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011810_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g36700

Target Alias Description ECC score Gene Family Method Actions
Als_g19269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19578 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 541 563
IPR002885 Pentatricopeptide_repeat 330 360
IPR002885 Pentatricopeptide_repeat 302 325
IPR002885 Pentatricopeptide_repeat 465 511
IPR002885 Pentatricopeptide_repeat 363 409
IPR002885 Pentatricopeptide_repeat 230 274
No external refs found!