Cba_g59818 (AGL30)

Aliases : AGL30

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g59818

Target	Alias	Description	ECC score	Gene Family Method
Ala_g05911	STK, AGL11	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0009.g011751	No alias	MADS/AGL-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.16G005300.1	AGL65, Ceric.16G005300	MADS/AGL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01037026001	AGL61, DIA	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
Len_g48344	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g56390	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g044965.1.1	AGL21, Solyc10g044965	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008289	lipid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	77	124

External Links

No external refs found!