MA_20622g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_20622g0010
Cluster HCCA cluster: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.07 Gene family
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Gene family
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01000086001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01009407001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01009789001 No alias No description available 0.04 Gene family
GSVIVT01011333001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01012461001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01017365001 No alias No description available 0.06 Gene family
GSVIVT01021756001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01023971001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01024588001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01031251001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01032721001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01033190001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01033389001 No alias No description available 0.02 Gene family
GSVIVT01036511001 No alias No description available 0.02 Gene family
LOC_Os01g10800 Os01g0205200 No description available 0.02 Gene family
LOC_Os01g62910 Os01g0848300 No description available 0.02 Gene family
LOC_Os03g16450 Os03g0271300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os04g02850 Os04g0118700 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os04g39410 Os04g0469400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
LOC_Os04g43430 Os04g0514500 No description available 0.02 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os05g50950 Os05g0586900 No description available 0.02 Gene family
LOC_Os12g01850 Os12g0109300 No description available 0.02 Gene family
LOC_Os12g06650 Os12g0163600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_17949g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_230261g0010 No alias No description available 0.02 Gene family
Smo47998 PACid_15423210 No description available 0.02 Gene family
Smo84768 PACid_15419386 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo90123 PACid_15410274 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Solyc01g007850.2.1 Solyc01g007850.2 No description available 0.02 Gene family
Solyc02g081900.3.1 Solyc02g081900.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.02 Gene family
Zm00001d020825 GRMZM5G851929 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d027555 GRMZM2G176523 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d028422 GRMZM2G019689 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d031535 GRMZM2G076257 No description available 0.02 Gene family
Zm00001d032185 GRMZM2G161368 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d033495 GRMZM5G849971 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d039873 GRMZM2G380195 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 258 284
IPR002885 Pentatricopeptide_repeat 664 688
IPR002885 Pentatricopeptide_repeat 230 256
IPR002885 Pentatricopeptide_repeat 937 960
IPR032867 DYW_dom 1036 1159
IPR002885 Pentatricopeptide_repeat 457 505
IPR002885 Pentatricopeptide_repeat 154 201
IPR002885 Pentatricopeptide_repeat 357 404
IPR002885 Pentatricopeptide_repeat 558 605
IPR002885 Pentatricopeptide_repeat 761 808
IPR002885 Pentatricopeptide_repeat 861 909
No external refs found!