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  5. Lfl_g36609

Lfl_g36609 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g36609

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00117010 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00122p00120860 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.02 OrthoFinder output from all 47 species
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.03 OrthoFinder output from all 47 species
AT3G16340 PDR1, ATPDR1 pleiotropic drug resistance 1 0.03 OrthoFinder output from all 47 species
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.04 OrthoFinder output from all 47 species
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.03 OrthoFinder output from all 47 species
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 OrthoFinder output from all 47 species
AT4G15236 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 OrthoFinder output from all 47 species
Aob_g27569 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31181 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18617 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23326 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37088 PDR11, ATPDR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37548 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g65335 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28059.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28060.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72947 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G030800.1 PEN3, ABCG36,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G065500.1 PDR11, ATPDR11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G065600.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020892.22 ATPDR7, PDR7 ABC transporter G family member 51 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Cre11.g467597 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Dac_g13610 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22063 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11270 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05962 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017204001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01031377001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01031378001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_34309 ATPDR3, PDR3 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Gb_38109 ABCG40, PDR12,... subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
LOC_Os02g11760.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g32690.1 PIS1, ABCG37,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os09g16330.2 ABCG40, PDR12,... subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
LOC_Os09g16449.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os12g13720.1 ATPDR5, PDR5,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_10425791g0020 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10427561g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
MA_10427683g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_184352g0010 ABCG40, PDR12,... ABC transporter G family member 36 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp1g24380.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Ore_g26198 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20429 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15527 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39006 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40984 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020342 PEN3, ABCG36,... subfamily ABCG transporter & original description: CDS=1195-5658 0.02 OrthoFinder output from all 47 species
Smo115821 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo118688 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo133564 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Smo82705 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc12g019640.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g100180.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g39516 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45075 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24868 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e026148_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e033689_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e035120_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e037233_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e039353_P001 PIS1, ABCG37,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e040575_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 400 479
IPR013581 PDR_assoc 738 802
IPR003439 ABC_transporter-like_ATP-bd 185 367
IPR029481 ABC_trans_N 111 160
IPR013525 ABC_2_trans 521 733
IPR003439 ABC_transporter-like_ATP-bd 905 1057
No external refs found!