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  5. Cba_g58079

Cba_g58079


Description : substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0007155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007155_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g58079

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00237290 evm_27.TU.AmTr_v1... Uncharacterized protein At4g10930 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aob_g22238 No alias substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01019556001 No alias Uncharacterized protein At4g10930 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
MA_10434274g0030 No alias Uncharacterized protein At4g10930 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g32654 No alias substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g07687 No alias substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g46358 No alias substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g021001 No alias substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g40518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g055910.3.1 Solyc12g055910 Uncharacterized protein At4g10930 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g08119 No alias substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e025321_P004 Zm00001e025321 Uncharacterized protein At4g10930 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004730 pseudouridylate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 164 200
IPR031736 EloA-BP1 869 943
No external refs found!