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  5. Cba_g58034

Cba_g58034


Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g58034
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00102970 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.02 OrthoFinder output from all 47 species
Dac_g04268 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05739 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28172 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g048110.4.1 Solyc07g048110 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Zm00001e012117_P001 RXW8, Zm00001e012117 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 371 643
IPR032880 Csc1/OSCA1-like_N 7 177
IPR027815 CSC1/OSCA1-like_cyt 198 360
No external refs found!