Lfl_g36472


Description : component *(DDR) of ISWI chromatin remodeling complex & original description: none


Gene families : OG0002395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002395_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g36472

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00076510 evm_27.TU.AmTr_v1... DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G25580 No alias BEST Arabidopsis thaliana protein match is: DDT domain... 0.02 OrthoFinder output from all 47 species
Adi_g087462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110261 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Als_g15932 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Als_g29182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G043300.1 Ceric.32G043300 component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020825.11 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g26694 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008087001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g58820.1 LOC_Os03g58820 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_136885g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g16010 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015567 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e006041_P001 Zm00001e006041 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018501 DDT_dom 144 188
No external refs found!