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  5. Cba_g57880

Cba_g57880 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g57880
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00120860 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 OrthoFinder output from all 47 species
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.04 OrthoFinder output from all 47 species
Ala_g07691 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27569 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33432 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G052500.1 PEN3, ABCG36,... subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000270.11 PDR1, ATPDR1 ABC transporter G family member 38 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020892.22 ATPDR7, PDR7 ABC transporter G family member 51 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Dac_g09408 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g21022 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01015456001 PDR4, ATPDR4 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01017201001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01017676001 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01033804001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_37005 ABCG40, PDR12,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
LOC_Os02g11760.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Lfl_g14948 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_18770g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_300423g0010 PEN3, ABCG36,... ABC transporter G family member 36 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_38272g0010 ATPDR7, PDR7 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_3894g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_949447g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Mp2g03890.1 ATPDR3, PDR3 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Mp2g14210.1 PEN3, ABCG36,... subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Mp2g21800.1 PEN3, ABCG36,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Mp4g06670.1 PEN3, ABCG36,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp8g09300.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp8g13070.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Ppi_g09231 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g055330.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc08g067610.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc09g091660.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc09g091670.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species
Solyc12g100190.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g28903 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30595 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024978_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 637 694
IPR043926 ABCG_dom 299 377
IPR003439 ABC_transporter-like_ATP-bd 84 266
IPR029481 ABC_trans_N 10 59
IPR013525 ABC_2_trans 420 632
No external refs found!