Gb_03550


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 572.0)


Gene families : OG_01_0016307 (Archaeplastida) Phylogenetic Tree(s): OG_01_0016307_tree ,
OG_02_0015855 (LandPlants) Phylogenetic Tree(s): OG_02_0015855_tree ,
OG_03_0015620 (SeedPlants) Phylogenetic Tree(s): OG_03_0015620_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03550
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
MA_109221g0020 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_109221g0020 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 LandPlants
Gb_03547 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 SeedPlants
MA_109221g0020 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 97 117
IPR002885 Pentatricopeptide_repeat 635 661
IPR002885 Pentatricopeptide_repeat 391 437
IPR002885 Pentatricopeptide_repeat 491 539
IPR002885 Pentatricopeptide_repeat 290 336
IPR002885 Pentatricopeptide_repeat 187 235
IPR032867 DYW_dom 665 789
No external refs found!