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  5. Cba_g57509

Cba_g57509


Description : not classified & original description: none


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g57509
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00199170 DRB3,... Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT3G26932 DRB3 dsRNA-binding protein 3 0.02 OrthoFinder output from all 47 species
Adi_g082906 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Aob_g20598 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ceric.19G020000.1 DRB2, Ceric.19G020000 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g07067 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ehy_g20248 DRB3 SSU processome assembly factor *(UTP2/NOP14) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017799001 DRB3 Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
GSVIVT01025192001 DRB2 Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os09g33460.1 LOC_Os09g33460 Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_15142g0010 DRB2 Double-stranded RNA-binding protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g30498 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Smo71410 DRB2 Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc03g118950.3.1 Solyc03g118950 Double-stranded RNA-binding protein 4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!