Gb_03361


Description : cyclin (CYCD)


Gene families : OG_01_0000252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000252_tree ,
OG_02_0000382 (LandPlants) Phylogenetic Tree(s): OG_02_0000382_tree ,
OG_03_0005800 (SeedPlants) Phylogenetic Tree(s): OG_03_0005800_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03361
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
AMTR_s00135p00066200 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
AMTR_s00164p00026810 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.03 Archaeplastida
AT3G50070 CYCD3;3 CYCLIN D3;3 0.03 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.06 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 Archaeplastida
GSVIVT01020167001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01034128001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
GSVIVT01037810001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
LOC_Os03g10650.1 No alias cyclin (CYCD) 0.05 Archaeplastida
LOC_Os03g27420.1 No alias cyclin (CYCD) 0.02 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os07g37010.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.08 Archaeplastida
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os11g47950.1 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_10429174g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436212g0010 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_114375g0010 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_559426g0020 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_93221g0010 No alias cyclin (CYCD) 0.04 Archaeplastida
Solyc02g079370.3.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Solyc04g078470.3.1 No alias cyclin (CYCD) 0.07 Archaeplastida
Solyc07g054950.2.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e000749_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003084_P002 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e003835_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.05 Archaeplastida
Zm00001e020929_P001 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.05 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e035575_P002 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e038767_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00135p00066200 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 LandPlants
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.02 LandPlants
GSVIVT01003610001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
GSVIVT01034128001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
GSVIVT01037810001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
LOC_Os11g47950.1 No alias cyclin (CYCD) 0.03 LandPlants
MA_10429174g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_10429174g0030 No alias cyclin (CYCD) 0.02 LandPlants
MA_10436212g0010 No alias cyclin (CYCD) 0.02 LandPlants
MA_114375g0010 No alias cyclin (CYCD) 0.02 LandPlants
MA_559426g0020 No alias cyclin (CYCD) 0.03 LandPlants
MA_93221g0010 No alias cyclin (CYCD) 0.02 LandPlants
MA_94639g0010 No alias cyclin (CYCD) 0.02 LandPlants
Zm00001e003835_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e035575_P002 No alias cyclin (CYCD) 0.02 LandPlants
AT5G67260 CYCD3;2 CYCLIN D3;2 0.03 SeedPlants
GSVIVT01000226001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 SeedPlants
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 SeedPlants
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 SeedPlants
Solyc02g092980.3.1 No alias cyclin (CYCD) 0.01 SeedPlants
Solyc04g078470.3.1 No alias cyclin (CYCD) 0.02 SeedPlants
Solyc12g088650.2.1 No alias cyclin (CYCD) 0.01 SeedPlants

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 188 283
IPR006671 Cyclin_N 59 186
No external refs found!