Cpa|evm.model.tig00000984.27


Description : 27.1.2 RNA.processing.RNA helicase Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing. ENHANCED SILENCING PHENOTYPE 3 (ESP3)


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00000984.27
Cluster HCCA cluster: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT2G47250 No alias RNA helicase family protein 0.02 Gene family
AT3G26560 No alias ATP-dependent RNA helicase, putative 0.04 Gene family
AT3G62310 No alias RNA helicase family protein 0.01 Gene family
Cre07.g349100 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.05 Gene family
Cre08.g358563 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.03 Gene family
Cre24.g755347 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.04 Gene family
GSVIVT01028153001 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
GSVIVT01029863001 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.04 Gene family
LOC_Os02g19860 Os02g0301500 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.02 Gene family
LOC_Os07g32430 Os07g0508000 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
LOC_Os11g20554 Os11g0310800 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
MA_10217744g0010 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
MA_10434449g0010 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
MA_277016g0010 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.01 Gene family
Smo82212 PACid_15409607 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Solyc09g008120.3.1 Solyc09g008120.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Solyc09g097820.3.1 Solyc09g097820.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
Solyc10g076910.2.1 Solyc10g076910.2 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.04 Gene family
Zm00001d011963 GRMZM2G300375 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Zm00001d015893 GRMZM2G029258 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.05 Gene family
Zm00001d028923 GRMZM2G385931 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.04 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011709 DUF1605 999 1076
IPR007502 Helicase-assoc_dom 853 880
IPR001650 Helicase_C 731 790
No external refs found!