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  5. Lfl_g36174

Lfl_g36174


Description : nucleocytoplasmic transport karyopherin *(XPO4) & original description: none


Gene families : OG0004951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004951_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g36174
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Aev_g07994 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.04 OrthoFinder output from all 47 species
Ala_g08098 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Als_g12362 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.1 OrthoFinder output from all 47 species
Aspi01Gene49965.t1 Aspi01Gene49965 nucleocytoplasmic transport karyopherin *(XPO4) &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.98 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os10g33710.1 LOC_Os10g33710 XPO4 nucleocytoplasmic transport karyopherin 0.04 OrthoFinder output from all 47 species
MA_164551g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g21410.1 No alias XPO4 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
Msp_g13581 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.02 OrthoFinder output from all 47 species
Pir_g14675 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Ppi_g59351 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.04 OrthoFinder output from all 47 species
Smo406082 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Spa_g08548 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Tin_g45950 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.04 OrthoFinder output from all 47 species
Zm00001e004578_P001 Zm00001e004578 XPO4 nucleocytoplasmic transport karyopherin 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR014877 XPO1_C_dom 974 1045
No external refs found!