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  5. Cba_g54269

Cba_g54269


Description : not classified & original description: none


Gene families : OG0000140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g54269
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Adi_g070338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g072564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g66839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022234 DUF3759 4 98
No external refs found!