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  5. Cba_g51236

Cba_g51236


Description : not classified & original description: none


Gene families : OG0001021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g51236
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Aop_g47887 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g28011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44632 NTMC2T1.2, SYTB,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16408 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31792 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40215 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 4 102
No external refs found!