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  5. Cba_g50792

Cba_g50792


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0001739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g50792
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Aop_g54296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020902.59 No alias Transcription initiation factor TFIID subunit 5... 0.01 OrthoFinder output from all 47 species
Nbi_g44066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1 14
IPR001680 WD40_repeat 19 56
IPR001680 WD40_repeat 103 140
IPR001680 WD40_repeat 61 98
No external refs found!