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  5. Cba_g49780

Cba_g49780


Description : not classified & original description: none


Gene families : OG0000140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g49780
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Adi_g070338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g34661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR022234 DUF3759 13 101
No external refs found!