Gb_02666


Description : TAC16 cofactor of plastid-encoded RNA polymerase


Gene families : OG_01_0008550 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008550_tree ,
OG_02_0008848 (LandPlants) Phylogenetic Tree(s): OG_02_0008848_tree ,
OG_03_0010031 (SeedPlants) Phylogenetic Tree(s): OG_03_0010031_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02666
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00257120 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.12 Archaeplastida
AT3G46780 PTAC16 plastid transcriptionally active 16 0.15 Archaeplastida
GSVIVT01024905001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.12 Archaeplastida
MA_806g0020 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.07 Archaeplastida
Mp8g16460.1 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.08 Archaeplastida
Pp3c1_14800V3.1 No alias plastid transcriptionally active 16 0.04 Archaeplastida
Solyc06g005710.3.1 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.16 Archaeplastida
Zm00001e026770_P002 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.04 Archaeplastida
AMTR_s00012p00257120 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.1 LandPlants
AT3G46780 PTAC16 plastid transcriptionally active 16 0.15 LandPlants
GSVIVT01024905001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.11 LandPlants
LOC_Os05g22614.1 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.01 LandPlants
MA_806g0020 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.07 LandPlants
Mp8g16460.1 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.08 LandPlants
Pp3c1_14800V3.1 No alias plastid transcriptionally active 16 0.04 LandPlants
Solyc06g005710.3.1 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.16 LandPlants
Zm00001e026770_P002 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.04 LandPlants
AMTR_s00012p00257120 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.1 SeedPlants
AT3G46780 PTAC16 plastid transcriptionally active 16 0.15 SeedPlants
GSVIVT01024905001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.11 SeedPlants
LOC_Os05g22614.1 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.01 SeedPlants
MA_806g0020 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.06 SeedPlants
Solyc06g005710.3.1 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.16 SeedPlants
Zm00001e026770_P002 No alias TAC16 cofactor of plastid-encoded RNA polymerase 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 141 255
No external refs found!