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  5. Lfl_g35563

Lfl_g35563


Description : not classified & original description: none


Gene families : OG0006414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g35563

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00208640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g10690... 0.06 OrthoFinder output from all 47 species
Adi_g058510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01812 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g007615 No alias not classified & original description: CDS=350-1960 0.06 OrthoFinder output from all 47 species
LOC_Os09g26190.1 LOC_Os09g26190 Pentatricopeptide repeat-containing protein At5g10690... 0.06 OrthoFinder output from all 47 species
Mp1g06100.1 No alias Pentatricopeptide repeat-containing protein At5g10690... 0.04 OrthoFinder output from all 47 species
Ore_g20397 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g18420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo52692 No alias Pentatricopeptide repeat-containing protein At5g10690... 0.05 OrthoFinder output from all 47 species
Zm00001e009851_P003 Zm00001e009851 Pentatricopeptide repeat-containing protein At5g10690... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 206 253
IPR002885 Pentatricopeptide_repeat 94 142
IPR000644 CBS_dom 532 592
IPR002885 Pentatricopeptide_repeat 286 313
No external refs found!