Expression profile for Smo402018 (Smo402018)

Aliases : PACid_15423429

Description : 27.4 RNA.RNA binding Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3. suppressor of abi3-5 (SUA) FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding INVOLVED IN: nuclear mRNA splicing, via spliceosome LOCATED IN: nucleus EXPRESSED IN: 23 plant structures EXPRESSED DURING: 14 growth stages CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), D111/G-patch (InterPro:IPR000467), Zinc finger, RanBP2-type (InterPro:IPR001876) BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2). & (chl4|521158 : 147.0

Condition specificity: Aerial tissue - Stress - Dark (SPM: 0.28, entropy: 3.53, tau: 0.42)
Tissue Specificity: Darkness stress (SPM: 0.45, entropy: 3.12, tau: 0.37)
Comparative Profile: Roots/rhizoids (SPM: 0.66, entropy: 1.58, tau: 0.2)

All conditions


Tissue Specificity

Note: SPM calculations for this profile are done using the maximum value.


Comparative Profile

Note: SPM calculations for this profile are done using the maximum value.