Expression profile for Smo90666 (Smo90666)

Aliases : PACid_15414232

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 38 (PUB38) FUNCTIONS IN: ubiquitin-protein ligase activity INVOLVED IN: protein ubiquitination LOCATED IN: ubiquitin ligase complex EXPRESSED IN: stem CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024) BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain (TAIR:AT5G62560.1) Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0 Bacteria - 0 Metazoa - 736 Fungi - 347 Plants - 385 Viruses - 0 Other Eukaryotes - 339 (source: NCBI BLink). & (q64ha9|spl11_orysa : 113.0

Condition specificity: Roots (SPM: 0.34, entropy: 3.52, tau: 0.55)
Tissue Specificity: Root (SPM: 0.55, entropy: 2.85, tau: 0.52)
Comparative Profile: Roots/rhizoids (SPM: 0.76, entropy: 1.58, tau: 0.39)

All conditions


Tissue Specificity

Note: SPM calculations for this profile are done using the maximum value.


Comparative Profile

Note: SPM calculations for this profile are done using the maximum value.