Expression profile for Smo429044 (Smo429044)


Attention: This gene has low abundance.

Aliases : PACid_15413944

Description : 17.7.1.2 hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase lipoxygenase, a defense gene conferring resistance Xanthomonas campestris lipoxygenase 1 (LOX1) CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246) BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1) Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0 Bacteria - 84 Metazoa - 533 Fungi - 49 Plants - 793 Viruses - 0 Other Eukaryotes - 25 (source: NCBI BLink). & (loc_os03g52860.1 : 86.3

Condition specificity: Stem - Bottom (SPM: 0.59, entropy: 2.92, tau: 0.83)
Tissue Specificity: Stem (SPM: 0.77, entropy: 2.65, tau: 0.79)
Comparative Profile: Stems (SPM: 0.84, entropy: 1.58, tau: 0.64)

All conditions


Tissue Specificity

Note: SPM calculations for this profile are done using the maximum value.


Comparative Profile

Note: SPM calculations for this profile are done using the maximum value.