Expression profile for Smo58350 (Smo58350)

Aliases : PACid_15406379

Description : 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. sensitive to proton rhizotoxicity 1 (STOP1) CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755) BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os01g65080.3 : 258.0

Condition specificity: Roots (SPM: 0.9, entropy: 0.79, tau: 0.96)
Tissue Specificity: Root (SPM: 0.99, entropy: 0.92, tau: 0.97)
Comparative Profile: Roots/rhizoids (SPM: 1.0, entropy: 0.92, tau: 0.96)

All conditions


Tissue Specificity

Note: SPM calculations for this profile are done using the maximum value.


Comparative Profile

Note: SPM calculations for this profile are done using the maximum value.