Co-expression neighborhood: Pir_g66481 (HRR)

  • Nodes show
  • No Feature
  • Clade
  • Depth
  • Family(default)
  • Label Co-occ.
  • Default
  • ECC Pair graph <a href="#" class="cy-node-shape" attr="family_clade_shape">Clade</a></li> <li><a href="#" class="cy-node-shape" attr="family_shape">Family</a></li> <li><a href="#" class="cy-node-shape" attr="lc_shape">Label Co-occ.</a></li> </div> </ul> </div> <div class="dropdown btn-group" role="group"> <button class="btn btn-default dropdown-toggle" type="button" data-toggle="dropdown"><i class="fa fa-link" aria-hidden="true" data-toggle="tooltip" title="Edge Options"></i> <span class="caret"></span></button> <ul class="dropdown-menu dropdown-menu-right cy-option-menu" style="width:250px"> <li class="dropdown-header">Edge Color</li> <li><a href="#" class="cy-edge-color" attr="color">No Feature <span class="text-muted">(default)</span></a></li> <li><a href="#" class="cy-edge-color" attr="depth_color">Depth</a></li> <li><a href="#" class="cy-edge-color" attr="link_pcc">PCC</a></li> <li><a href="#" class="cy-edge-color" attr="hrr">HRR</a></li> <li class="dropdown-header">Edge Width</li> <li><a href="#" class="cy-edge-width" attr="default_width">Default</a></li> <li><a href="#" class="cy-edge-width" attr="depth">Depth</a></li> <li><hr></li> <li class="dropdown-header"><abbr title="Click to show help" href="/help/hrr" data-target="#helpModal">HRR</abbr> Filter</li> <li><p><strong>Cutoff:</strong> <span id="cy-edge-score-value" class="text-muted">100</span></p></li> <li class="text-center"><input id="cy-edge-score" data-slider-id="cy-edge-score-slider" type="text" data-slider-min="0" data-slider-max="100" data-slider-step="1" data-slider-value="100" data-slider-tooltip="hide"></li> </ul> </div> <div class="dropdown btn-group" role="group"> <button class="btn btn-default dropdown-toggle" type="button" data-toggle="dropdown"><i class="fa fa-cog" aria-hidden="true" data-toggle="tooltip" title="Other Options"></i> <span class="caret"></span></button> <ul class="dropdown-menu dropdown-menu-right" style="width:200px"> <li class="dropdown-header">Layout</li> <li><a href="#" class="cy-layout" layout="breadthfirst">Breadthfirst</a></li> <li><a href="#" class="cy-layout" layout="circle">Circle</a></li> <li><a href="#" class="cy-layout" layout="concentric">Concentric</a></li> <li><a href="#" class="cy-layout" layout="cose">Cose</a></li> <li><a href="#" class="cy-layout" layout="grid">Grid</a></li> <li><a href="#" class="cy-layout" layout="random">Random</a></li> </ul> </div> </div> <div class="dropdown btn-group" role="group"> <button class="btn btn-default dropdown-toggle" type="button" data-toggle="dropdown"><i class="fa fa-download" aria-hidden="true" data-toggle="tooltip" title="Export"></i> <span class="caret"></span></button> <ul class="dropdown-menu dropdown-menu-right"> <li class="dropdown-header">Export</li> <li><a data-toggle="modal" data-target="#data_modal" style="cursor:pointer">Data</a></li> <li><a data-toggle="modal" data-target="#image_modal" style="cursor:pointer">Image</a></li> </ul> </div> </div> </div> <div id="loading"> <svg id="svg2" xmlns="http://www.w3.org/2000/svg" height="150" width="150" version="1.1"> <defs id="defs4"> <lineargradient id="linearGradient4293"> <stop id="stop4295" stop-color="#009717" offset="0"/> <stop id="stop4297" stop-color="#93be00" offset="1"/> </lineargradient> <lineargradient id="linearGradient4303" y2="243.98" xlink:href="#linearGradient4293" gradientunits="userSpaceOnUse" x2="355.3" gradienttransform="matrix(.28958 .0066463 -.0047047 .20498 -26.416 -37.275)" y1="633.81" x1="193"/> <lineargradient id="linearGradient4305" y2="243.98" xlink:href="#linearGradient4293" gradientunits="userSpaceOnUse" x2="355.3" y1="633.81" x1="193"/> </defs> <g id="leaf_pairs" fill-rule="evenodd" transform="matrix(.16999 0 0 .16999 -3.6935 -12.234)"> <g class="gsap_start_hidden leaf_pair_01"> <path id="path4150" d="m124.26 509.36c1.6371-1.5401 52.694-2.3206 69.432 14.365 7.9701 7.9453 12.095 13.336 6.9432 33.04-3.5384 13.534-36.383 1.2024-45.969-11.492-15.522-20.556-17.938-27.546-30.406-35.913z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4152" d="m322.26 528.99c-0.82456-3.2982-42.199-23.901-63.207-15.562-23.501 9.328-31.924 40.351-30.167 39.983-1.6704 2.0879 29.042 12.067 42.617 7.422 13.574-4.6447 26.092-23.153 50.757-31.843z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4336" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m295.02 524.9c-13.774-0.21744-26.061 1.716-36.779 5.9316-17.15 6.745-29.858 17.406-38.442 36.151-0.59589 1.2273-0.11684 6.3666 0.4223 5.1133 8.4066-18.356 22.068-32.841 38.752-39.403 16.684-6.5619 37.633-7.94 62.243-3.5788l0.41165-0.0542 0.11117-0.11634c1.2937 0.006 1.1286-0.4709-0.16238-0.55545l0.0213-0.0233c-9.2768-1.6388-18.346-3.335-26.578-3.4649z" fill="#114b00"/> <path id="path4346" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m125.89 508.66c-1.1662 0.009-1.5954 0.9256-0.46804 1.2243 8.0817 2.2824 30.205 7.1287 41.327 13.785 11.122 6.6566 20.965 15.359 40.054 48.738 0.91706 1.032 1.5537-4.1685 0.56732-5.1343-17.327-31.218-28.191-38.494-39.594-45.318-11.403-6.8245-34.322-10.686-42.142-12.894-0.0956-0.029-0.525-0.0435-0.6249-0.043z" fill="#114b00"/> </g> <g class="gsap_start_hidden leaf_pair_02"> <path id="path4154" d="m206.62 475.84c9.6471-8.6564-1.0796-40.345-22.745-44.772-31.346-6.4039-41.072-5.5034-56.264-9.098 10.482 5.1848 28.686 36.537 40.701 48.602 9.0952 9.1329 39.213 7.7593 38.307 5.2672z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4156" d="m347.4 454.29s-36.903-6.0877-59.616-6.7038c-31.137-0.84459-47.019 35.234-43.335 36.871-2.3335 1.4585 16.667 17.286 42.377 7.1826 21.86-8.59 55.711-36.809 60.573-37.35z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4338" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m343.47 453.74c-67.953-0.73324-97.791 19.699-118.54 49.355-0.79615 1.0979-0.55763 6.3906 0.20094 5.2664 20.502-29.307 52.998-54.34 120.51-53.612 1.3455 0.0268 0.70731-0.84296-0.63846-0.84506z" fill="#114b00"/> <path id="path4348" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m129.84 422.44c-1.0517-0.0286-0.68991 0.36633 0.23497 0.86781 18.418 10.339 37.273 13.422 51.418 21.578 14.145 8.1555 25.909 23.984 31.907 60.811 0.21328 1.3168 2.9396-2.5925 2.7257-3.9091-6.0489-37.135-18.98-50.187-33.633-58.636-14.653-8.4487-33.535-10.227-51.556-20.343-0.14447-0.0839-0.92986-0.36352-1.0968-0.36811z" fill="#114b00"/> </g> <g class="gsap_start_hidden leaf_pair_03"> <path id="path4158" d="m223.86 400.9c2.9975 0.99917 10.559-19.002 6.4644-28.012-12.114-26.654-82.486-32.347-92.895-37.35 5.7011 3.1444 39.361 66.073 51.715 69.192 15.786 3.9864 28.676 0.0552 34.716-3.8307z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4160" d="m363.38 396.85c1.3509-2.7018-46.137-11.108-70.399-11.264-26.153-0.16807-40.023 33.279-38.077 34.526-2.7614 2.9981 18.735 25.92 41.627 15.916 23.667-10.342 66.849-39.179 66.849-39.179z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4340" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m361.22 395.95c-29.247 0.61794-55.868 3.2465-77.498 9.7676s-39.159 15.066-48.274 31.357c-0.65104 1.1641 0.37948 5.5992 1.0305 4.4351 8.7849-15.702 26.484-27.444 47.822-33.877 21.338-6.4329 49.207-9.8438 78.36-10.46 1.3333-0.0287 1.2995-0.91472-0.0339-0.88605z" fill="#114b00"/> <path id="path4350" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m140.06 336.48c-0.99766-0.0266-0.56007 0.69255 0.26463 1.2546 14.895 7.0324 36.829 14.981 55.799 27.344s33.78 33.856 29.109 73.841c-0.1818 1.3452 3.2838-1.1001 3.4175-2.451 4.7368-40.541-12.028-60.418-31.434-73.065s-42.439-19.729-56.576-26.47c-0.16346-0.11824-0.37852-0.44754-0.5802-0.45271z" fill="#114b00"/> </g> <g class="gsap_start_hidden leaf_pair_04"> <path id="path4162" d="m250.25 337.6c1.4633 0.69177 15.49-25.007 0.00001-40.158-20.066-19.627-45.278-22.429-69.787-28.405 2.2284 1.411 15.718 50.723 35.506 64.4 11.947 8.2571 34.618 5.5097 34.281 4.1627z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4164" d="m273.52 353.76c-2.0279-0.46089 15.092-26.86 40.893-27.18 22.291-0.27667 60.241 7.7985 63.665 7.1011 0.77973 0.0875-37.577 24.498-61.217 35.016-29.665 13.199-50.135-7.0568-43.341-14.937z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4342" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m377.16 333.69c-0.0235 0.001-0.0703 0.006-0.0703 0.006-28.137 2.4376-56.223 5.5047-78.161 10.525-21.938 5.0207-38.984 11.243-44.368 23.589-0.60481 1.2489 0.8615 4.0532 1.3651 2.7601 4.8942-11.224 21.72-19.427 43.451-24.4 21.731-4.9734 49.591-9.2452 77.715-11.682 1.3321-0.0689 1.2104-0.93145-0.12168-0.86238z" fill="#114b00"/> <path id="path4352" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m181.44 269.31c-1.0482-0.0175-0.79223 0.46364 0.13119 0.96001 22.788 12.589 43.543 26.972 55.404 42.305 11.862 15.334 16.452 34.347 8.6732 54.949-0.47135 1.2474 2.5271 0.10963 2.9985-1.1378 7.9955-21.176 2.0771-39.308-10.09-55.036s-33.838-29.178-56.726-41.823c-0.14541-0.0828-0.22392-0.21506-0.39117-0.21812z" fill="#114b00"/> </g> <g class="gsap_start_hidden leaf_pair_05"> <path id="path4166" d="m283.87 272.44c1.7352-0.91851 7.9462-19.061 3.846-33.283-5.975-20.725-46.572-35.978-47.749-36.73 1.8138 0.73988 3.7974 39.966 12.243 59.258 6.9738 15.929 29.925 11.674 31.66 10.755z" stroke="#114b00" stroke-linecap="round" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4168" d="m303.87 284.11c-1.2314-0.48378 10.736-24.39 34.629-23.721 18.056 0.50579 53.849 6.0602 53.849 6.0602-5.7438-0.89456-42.065 33.913-61.814 31.686-16.35-1.8436-28.705-13.397-26.665-14.025z" stroke="#114b00" stroke-width="1px" fill="url(#linearGradient4305)"/> <path id="path4344" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m389.23 266.08-0.0703 0.006c-27.985 2.8066-51.525 6.2886-67.902 10.839-16.377 4.5503-28.773 8.3913-34.292 14.83-0.86849 1.013 0.38852 4.575 1.257 3.562 5.0287-5.8674 17.369-11.965 33.57-16.466 16.201-4.5012 40.794-9.356 68.709-12.156 1.2692-0.13775 0.005-0.64166-1.2717-0.61487z" fill="#114b00"/> <path id="path4354" style="color-rendering:auto;text-decoration-color:#000000;color:#000000;isolation:auto;mix-blend-mode:normal;shape-rendering:auto;solid-color:#000000;block-progression:tb;text-decoration-line:none;text-decoration-style:solid;image-rendering:auto;white-space:normal;text-indent:0;text-transform:none" d="m241.11 203.04c-0.89692 0.0138-0.90268 0.47885-0.25099 1.0952 14.527 14.143 28.078 30.756 35.036 44.547 6.9581 13.791 8.3598 29.952 4.598 43.27-0.42115 1.315 3.5369-0.77275 3.8654-2.1139 3.918-13.871 0.43532-27.957-6.6783-42.057-7.1136-14.099-21.228-30.216-35.848-44.449-0.19133-0.19142-0.45206-0.29712-0.72266-0.29297z" fill="#114b00"/> </g> </g> <path class="gsap_start_hidden stem" d="m30.724 100.48c1.072-55.803 16.195-69.278 30.949-83.863-25.171 23.733-28.283 53.519-28.418 84.123z" stroke="#114b00" stroke-width=".16999px" fill="url(#linearGradient4303)"/> </svg> </div> <div id="cy" json="/network/json/4067977/21" cycss="/static/js/cytoscape.cycss"></div> <hr> <div class="text-center"> <div id="legend" url="/static/svg/legend.svg"></div> </div> </div> <div class="modal" id="data_modal" tabindex="-1" role="dialog" aria-labelledby="dataModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-header"> <h4 class="modal-title" id="dataModalLabel"><strong>Export Data</strong></h4> </div> <div class="modal-body" syle="width:700px;min-height:200px"> <button class="btn btn-primary" id="cy-download-xgmml">XGMML</button> <span class="text-muted">(compatible with <a href="http://www.cytoscape.org/">Cytoscape</a>)</span> <hr> <h3>Other formats, compatible with <a href="http://js.cytoscape.org/">Cytoscape.js</a></h3> <button class="btn btn-default" id="cy-download-json">JSON</button> <span class="text-muted">(network only)</span> <br><br> <button class="btn btn-default" id="cy-download-jsoncy">JSON</button> <span class="text-muted">(network + colors/shapes)</span> <br><br> </div> <div class="modal-footer"> <button type="button" class="btn btn-default" data-dismiss="modal">Close</button> </div> </div> </div> </div> <div class="modal" id="image_modal" tabindex="-1" role="dialog" aria-labelledby="imageModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-header"> <h4 class="modal-title" id="imageModalLabel"><strong>Export Image</strong></h4> </div> <div class="modal-body" style="width:700px;min-height:200px"> <table> <tbody> <tr> <td class="col-md-3"><strong>Image with Legend</strong></td> <td class="col-md-9"><button class="btn btn-primary" id="cy-download-svg-with-legend">SVG</button> <button class="btn btn-primary" id="cy-download-png-with-legend">PNG</button></td> </tr> <tr><td colspan="2"><br></td></tr> <tr><td colspan="2">Other Options</td></tr> <tr><td colspan="2"><hr></td></tr> <tr> <td class="col-md-3"><strong>Image</strong></td> <td class="col-md-9"><button class="btn btn-default" id="cy-download-svg">SVG</button> <button class="btn btn-default" id="cy-download-img-lowres">PNG</button></td> </tr> <tr><td><br></td></tr> <tr> <td class="col-md-3"><strong>Legend</strong></td> <td class="col-md-9"><button class="btn btn-default" id="cy-download-svg-legend">SVG</button> <button class="btn btn-default" id="cy-download-png-legend">PNG</button></td> </tr> <tr><td><br></td></tr> </tbody> </table> </div> <div class="modal-footer"> <button type="button" class="btn btn-default" data-dismiss="modal">Close</button> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); }, function(xhr, status, error) { // Upon failure... set the tooltip content to error api.set('content.text', status + ': ' + error); }); return 'Loading...'; // Set some initial text } }, show: { effect: function() { $(this).fadeTo(500, 1); } }, hide: { effect: function() { $(this).fadeTo(500, 0); } }, position: { viewport: $(window) }, style: 'qtip-bootstrap' }); }); } $(function () { init_qtip(); $("#leafy_loader").html(get_loader_svg('loader_leafy')); init_planet_loader('loader_leafy'); $('[data-toggle="popover"]').popover({container: 'body'}); $('a[data-target=#helpModal], abbr[data-target=#helpModal]').click(function(ev) { ev.preventDefault(); var target = $(this).attr("href"); // load the url and show modal on success $("#helpModal .modal-content").load(target, function() { $("#helpModal").modal("show"); }); }); }); </script> <script src="/static/js/planet_pagination.js"></script> <script src="/static/js/planet_ajax_table.js"></script> <script type="text/javascript"> var csrf_token = "IjQ5NmY4ZGVhODFlMjRmY2Y4Nzc1YjEwYzU1OTBjNDgwZWYxNGU1MTMi.GlluVQ.W1mq-VDT9dfIsdQSGOTORzT7c3c"; $.ajaxSetup({ beforeSend: function(xhr, settings) { if (!/^(GET|HEAD|OPTIONS|TRACE)$/i.test(settings.type) && !this.crossDomain) { xhr.setRequestHeader("X-CSRFToken", csrf_token); } } }); </script> <script src="/static/js/bootstrap-slider.min.js"></script> <script> $( document ).ready(function() { $('#footer').hide(2000); $('[data-toggle="tooltip"]').tooltip(); $('#cy-edge-score').slider({ formatter: function(value) { return 'Cut-off: ' + value; } }); $('#cy-edge-score').on("slide", function(slideEvt) { $("#cy-edge-score-value").text(slideEvt.value); }); }); </script> <script src="/static/js/pablo.min.js"></script> <script src="/static/js/planet_svg_legend.js"></script> <script src="/static/js/XMLWriter-1.0.0-min.js"></script> <script src="/static/js/planet_xgmml.js"></script> <script src="/static/js/planet_svg.js"></script> <script src="/static/js/cytoscape.min.js"></script> <script src="/static/js/cytoscape-qtip.js"></script> <script src="/static/js/planet_graph.js"></script> <script> $(document).ready(function () { init_planet_loader(''); }); </script> </body> </html>