Sequence Description Alias PCC hrr Zm00001e019318_P002 exoribonuclease (RNase R) RNR1, ATMTRNASEII, EMB2730, Zm00001e019318 0.8601088958867489 1 Zm00001e003867_P004 endoribonuclease (RNase E) RNEE/G, Zm00001e003867 0.8594534453773497 2 Zm00001e033939_P001 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays (sp|a7xn92|cfm3_maize : 529.0) Zm00001e033939 0.8129770031630962 3 Zm00001e028874_P001 RNA editing factor (OZ-type) VAR3, Zm00001e028874 0.8089826230806584 4 Zm00001e037650_P001 nuclear-encoded organellar RNA polymerase (NEP) PDE319, SCA3, Zm00001e037650 0.8030454238755282 5 Zm00001e008312_P001 chaperone component ClpC of chloroplast Clp-type protease complex HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, Zm00001e008312 0.7983281950236453 12 Zm00001e031052_P001 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana (sp|q9fkc3|pp424_arath : 600.0) Zm00001e031052 0.7966188821149621 7 Zm00001e011483_P001 valine-tRNA ligase EMB2247, Zm00001e011483 0.7953035154690192 22 Zm00001e036242_P002 Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana (sp|q5g1s8|pp241_arath : 1199.0) EMB1270, Zm00001e036242 0.7949142316496632 9 Zm00001e013900_P001 exo-/endoribonuclease (RNase J) emb2746, Zm00001e013900 0.7927825195127457 10 Zm00001e036062_P001 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana (sp|q9le82|ragp1_arath : 95.9) emb2004, Zm00001e036062 0.7920590547197445 11 Zm00001e014431_P001 no hits & (original description: none) Zm00001e014431 0.785991720753467 13 Zm00001e008967_P001 component SecA2 of inner envelope Sec2 post-import insertion system SECA2, Zm00001e008967 0.785752362236552 14 Zm00001e028053_P001 Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana (sp|q9sa76|ppr64_arath : 622.0) EMB2279, EMB88, Zm00001e028053 0.7817985247055318 54 Zm00001e041364_P001 no hits & (original description: none) Zm00001e041364 0.7711131349587756 55 Zm00001e029916_P001 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica (sp|q5vry0|rh39_orysj : 793.0) RH39, Zm00001e029916 0.7645801823136573 92 Zm00001e041749_P001 DNA polymerase (POP) POLGAMMA2, Zm00001e041749 0.7645763898724863 20 Zm00001e019697_P001 PAP5/TAC12 cofactor of plastid-encoded RNA polymerase. transcriptional coactivator (HEMERA) PTAC12, HMR, Zm00001e019697 0.7645714595840092 66 Zm00001e040911_P002 component Tic40 of inner envelope TIC translocation system TIC40, ATTIC40, PDE120, Zm00001e040911 0.7638527784818169 22 Zm00001e019902_P002 Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana (sp|q9fgr7|pp426_arath : 603.0) EMB1006, Zm00001e019902 0.7611306511443493 23 Zm00001e006550_P001 no hits & (original description: none) Zm00001e006550 0.7607845249522652 24 Zm00001e029743_P002 component Toc90|Toc120|Toc132|Toc159 of outer envelope TOC translocation system PPI2, ATTOC159, TOC159, TOC160, TOC86, Zm00001e029743 0.7539227078343677 28 Zm00001e032499_P001 no hits & (original description: none) Zm00001e032499 0.7538188527296134 51 Zm00001e028275_P001 plastidial UMP kinase (PUMPKIN) Zm00001e028275 0.7532188719475028 37 Zm00001e036824_P001 type-Ia DNA topoisomerase Zm00001e036824 0.7527906172223109 31 Zm00001e000706_P004 methionine-tRNA ligase OVA1, Zm00001e000706 0.752583210757659 81 Zm00001e040778_P001 chaperone component ClpC of chloroplast Clp-type protease complex HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, Zm00001e040778 0.7506983196786421 84 Zm00001e024327_P001 chaperone (Hsp90) EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88, Zm00001e024327 0.7502440104599694 35 Zm00001e028549_P001 PAP3/TAC10 cofactor of plastid-encoded RNA polymerase PTAC10, PDE312, Zm00001e028549 0.7495267190949596 88 Zm00001e003142_P002 no hits & (original description: none) Zm00001e003142 0.7487034973055424 85 Zm00001e013000_P001 glycerol-3-phosphate acyltransferase (ATS1) ATS1, ACT1, Zm00001e013000 0.7456509678885316 61 Zm00001e021412_P001 FSD2-interacting component of plastid-encoded RNA polymerase Zm00001e021412 0.7439400521220118 75 Zm00001e020457_P002 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana (sp|p82715|ppd5_arath : 307.0) Zm00001e020457 0.740567179847295 53 Zm00001e036241_P001 No annotation Zm00001e036241 0.7378302868574529 48 Zm00001e013755_P002 no hits & (original description: none) Zm00001e013755 0.7372013320682592 51 Zm00001e025292_P002 Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana (sp|q9sqk3|em506_arath : 289.0) EMB139, EMB506, Zm00001e025292 0.7348815440712234 53 Zm00001e035316_P001 Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana (sp|q8rws8|pp199_arath : 978.0) EMB2654, Zm00001e035316 0.7338771677350878 54 Zm00001e020710_P002 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana (sp|q0wvv0|ppr31_arath : 646.0) Zm00001e020710 0.7333704612698656 55 Zm00001e032593_P001 no hits & (original description: none) Zm00001e032593 0.7321256500232063 56 Zm00001e015566_P003 OTP51 plastidial RNA splicing factor OTP51, Zm00001e015566 0.7310528353021273 62 Zm00001e011170_P004 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana (sp|f4jfj3|y3206_arath : 924.0) Zm00001e011170 0.7298561870441491 58 Zm00001e017082_P001 no hits & (original description: none) Zm00001e017082 0.7293307397692265 86 Zm00001e024320_P002 P1B-type heavy metal cation-transporting ATPase (HMA) PAA1, HMA6, Zm00001e024320 0.7280116661283215 70 Zm00001e004314_P001 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 808.0) MEE40, Zm00001e004314 0.7267308586293318 64 Zm00001e031351_P001 RNA editing factor (ECD1) EMB2261, Zm00001e031351 0.7265291601766207 73 Zm00001e027690_P001 no hits & (original description: none) Zm00001e027690 0.7227138990783187 66 Zm00001e010930_P002 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica (sp|a2ypr8|obgc1_orysi : 681.0) CPSAR1, EMB269, ATOBGC, Zm00001e010930 0.7205104826354013 68 Zm00001e017789_P001 Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana (sp|q9fgp9|rer1_arath : 99.0) Zm00001e017789 0.7193790348384954 78 Zm00001e010645_P002 transcription factor (mTERF) Zm00001e010645 0.7168308247710005 71 Zm00001e004642_P001 PAP1/TAC3 cofactor of plastid-encoded RNA polymerase PTAC3, Zm00001e004642 0.7166603261309449 72 Zm00001e026821_P001 Protein ABCI12, chloroplastic OS=Arabidopsis thaliana (sp|q944h2|ab12i_arath : 343.0) Zm00001e026821 0.7144292343035724 87 Zm00001e029825_P001 subunit beta of Cpn60 chaperonin complex. component CPN60b of CPN60 assembly chaperone complex. chaperone (Hsp60) CPN60B, LEN1, Zm00001e029825 0.7128693221886633 93 Zm00001e041034_P001 CFM2-type plastidial RNA splicing factor ATCFM2, CFM2, Zm00001e041034 0.7118971042769314 80 Zm00001e041033_P001 CFM2-type plastidial RNA splicing factor ATCFM2, CFM2, Zm00001e041033 0.7118971042769314 81 Zm00001e000301_P001 Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana (sp|o49619|pp350_arath : 691.0) Zm00001e000301 0.7102341727434722 84 Zm00001e004979_P002 component FLN2 of plastid-encoded RNA polymerase FLN2, Zm00001e004979 0.7099280565076033 86 Zm00001e002552_P001 RNA editing factor (SEL1/PDM1) Zm00001e002552 0.7065311416945764 88 Zm00001e034031_P002 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica (sp|q6h601|rh22_orysj : 854.0) Zm00001e034031 0.7064635737354962 89 Zm00001e029672_P001 tRNA pseudouridine synthase (TruB) Zm00001e029672 0.7044160478473952 90 Zm00001e029119_P001 Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana (sp|p93011|pp182_arath : 624.0) Zm00001e029119 0.7031548847096067 92 Zm00001e004499_P001 component Tic110 of inner envelope TIC translocation system TIC110, ATTIC110, Zm00001e004499 0.702223088377674 93 Zm00001e017000_P001 myosin adaptor protein (MadB) Phox2, Zm00001e017000 0.7004898925621913 96 Zm00001e018529_P001 M18-class aspartyl aminopeptidase (DAP) Zm00001e018529 0.7001864307810858 97