Sequence Description Alias PCC hrr Zm00001e032889_P001 polynucleotide phosphorylase (PNP) RIF10, PNP, Zm00001e032889 0.9088805300339656 4 Zm00001e040416_P002 protease (Deg) DEGP2, Zm00001e040416 0.8978271850322684 15 Zm00001e025691_P001 leucine-tRNA ligase EMB2369, Zm00001e025691 0.8975758266236422 20 Zm00001e013455_P001 no hits & (original description: none) Zm00001e013455 0.895366747933216 17 Zm00001e031671_P001 no hits & (original description: none) Zm00001e031671 0.8931898348436456 6 Zm00001e011327_P001 no hits & (original description: none) emb2738, Zm00001e011327 0.8927225343278946 49 Zm00001e028451_P001 no hits & (original description: none) Zm00001e028451 0.8913736969998766 7 Zm00001e035192_P001 plastidial mRNA processing factor (CRP1) Zm00001e035192 0.8831849633145837 14 Zm00001e006285_P003 lysine-tRNA ligase OVA5, ATKRS-2, Zm00001e006285 0.8823219420126984 9 Zm00001e032339_P002 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays (sp|a7xn92|cfm3_maize : 458.0) EMB1865, Zm00001e032339 0.8768460973479446 22 Zm00001e025401_P001 Putative nitric oxide synthase OS=Oryza sativa subsp. japonica (sp|q6ypg5|nos_orysj : 773.0) ATNOA1, ATNOS1, RIF1, NOS1, NOA1, Zm00001e025401 0.8751582055813448 11 Zm00001e006024_P001 Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica (sp|q851q6|obgc2_orysj : 703.0) CPSAR1, EMB269, ATOBGC, Zm00001e006024 0.8746504550249657 37 Zm00001e023409_P003 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 160.6) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum (sp|p94026|rbcmt_tobac : 107.0) Zm00001e023409 0.8734382509361381 52 Zm00001e032446_P002 no hits & (original description: none) Zm00001e032446 0.8712498545349888 14 Zm00001e000423_P001 rRNA pseudouridine synthase (RsuA) SVR1, Zm00001e000423 0.8708495253910185 15 Zm00001e041970_P002 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana (sp|q0wmy5|pp365_arath : 998.0) Zm00001e041970 0.8700188008903399 16 Zm00001e027880_P001 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana (sp|p82715|ppd5_arath : 307.0) Zm00001e027880 0.869748576533558 17 Zm00001e028053_P001 Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana (sp|q9sa76|ppr64_arath : 622.0) EMB2279, EMB88, Zm00001e028053 0.8679411404403651 18 Zm00001e016040_P001 isoleucine-tRNA ligase OVA2, Zm00001e016040 0.8669076485562803 37 Zm00001e039903_P001 component SecY1 of thylakoid membrane Sec1 translocation system SCY1, Zm00001e039903 0.8663001104342907 98 Zm00001e039578_P001 inositol polyphosphate 1-phosphatase FRY1, ATSAL1, ALX8, HOS2, SAL1, RON1, Zm00001e039578 0.8650491116981309 21 Zm00001e031487_P001 no hits & (original description: none) Zm00001e031487 0.8637717278959088 60 Zm00001e026650_P001 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase PTAC14, Zm00001e026650 0.8600617977744354 23 Zm00001e015769_P001 RNA helicase (ISE2) ISE2, PDE317, EMB25, Zm00001e015769 0.8598293884046008 24 Zm00001e024147_P003 component cpSRP54 of thylakoid membrane SRP insertion system 54CP, SRP54CP, CPSRP54, FFC, Zm00001e024147 0.857934596695142 57 Zm00001e016109_P001 IF-3 translation initiation factor Zm00001e016109 0.8572244049455844 84 Zm00001e012006_P002 ATP synthase complex assembly factor (BFA1) Zm00001e012006 0.8571677625929857 65 Zm00001e035006_P002 Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana (sp|q0wrj7|fk202_arath : 167.0) Zm00001e035006 0.8567991847267267 46 Zm00001e011796_P001 component CHL-D of magnesium-chelatase complex V157, PDE166, ALB1, CHLD, ALB-1V, Zm00001e011796 0.8566101217056757 89 Zm00001e029186_P001 Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana (sp|q9fxh1|ppr52_arath : 671.0) Zm00001e029186 0.8556422870636712 31 Zm00001e029091_P001 phenylalanine-tRNA ligase Zm00001e029091 0.8551788609105102 43 Zm00001e002481_P001 Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana (sp|o82290|skl2_arath : 325.0) SKL2, Zm00001e002481 0.8549116291287917 41 Zm00001e006223_P001 TAC13 cofactor of plastid-encoded RNA polymerase PTAC13, Zm00001e006223 0.8533683546684848 73 Zm00001e001632_P001 no hits & (original description: none) Zm00001e001632 0.8518289967406201 37 Zm00001e039095_P002 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica (sp|q0dvx2|rh50_orysj : 991.0) Zm00001e039095 0.851591959437896 38 Zm00001e019697_P001 PAP5/TAC12 cofactor of plastid-encoded RNA polymerase. transcriptional coactivator (HEMERA) PTAC12, HMR, Zm00001e019697 0.8504464978804184 39 Zm00001e002719_P003 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana (sp|q0wlc6|pp349_arath : 796.0) MRL1, Zm00001e002719 0.8503043253924487 40 Zm00001e032251_P002 plastidial mRNA chaperone (RLSB/BSF) Zm00001e032251 0.8502059970191832 41 Zm00001e026555_P001 no hits & (original description: none) Zm00001e026555 0.8501077753147949 42 Zm00001e029916_P001 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica (sp|q5vry0|rh39_orysj : 793.0) RH39, Zm00001e029916 0.8489483073831091 44 Zm00001e007372_P001 Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana (sp|q8lps6|ppr3_arath : 427.0) Zm00001e007372 0.847788897941795 50 Zm00001e013900_P001 exo-/endoribonuclease (RNase J) emb2746, Zm00001e013900 0.8470579543783333 48 Zm00001e028549_P001 PAP3/TAC10 cofactor of plastid-encoded RNA polymerase PTAC10, PDE312, Zm00001e028549 0.8457745506624869 50 Zm00001e032878_P001 proline-tRNA ligase OVA6, PRORS1, Zm00001e032878 0.8451905971556473 51 Zm00001e020362_P005 [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana (sp|q9xi84|rbcmt_arath : 82.8) Zm00001e020362 0.8446463729976865 52 Zm00001e012374_P001 component NOL of chlorophyll b reductase complex NOL, Zm00001e012374 0.8438153747600331 66 Zm00001e009851_P003 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana (sp|q8vyd6|pp374_arath : 552.0) Zm00001e009851 0.8433114871432688 92 Zm00001e028581_P003 Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana (sp|q56xr7|str4a_arath : 183.0) Zm00001e028581 0.8429737473886608 81 Zm00001e033691_P001 glutamyl-tRNA reductase regulator protein (FLU) FLU, Zm00001e033691 0.8400775274602235 72 Zm00001e024190_P001 Uncharacterized protein At3g49140 OS=Arabidopsis thaliana (sp|q0wmn5|y3913_arath : 283.0) Zm00001e024190 0.8389853064474905 60 Zm00001e027678_P001 component PnsL5 of NDH lumen subcomplex L. protein folding catalyst ATCYP20-2, CYP20-2, Zm00001e027678 0.8364710291995407 63 Zm00001e016157_P003 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex CLPP6, NCLPP1, NCLPP6, Zm00001e016157 0.8358230768688174 65 Zm00001e011620_P001 no hits & (original description: none) Zm00001e011620 0.8344696376066009 66 Zm00001e034992_P001 asparagine-tRNA ligase ATNS1, NS1, OVA8, Zm00001e034992 0.8336681056655368 67 Zm00001e008326_P002 HCF106 protein involved in PS-II assembly. component Hcf106 of thylakoid membrane Tat translocation system HCF106, Zm00001e008326 0.8320665012898921 100 Zm00001e027645_P001 Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana (sp|o80934|y2766_arath : 396.0) Zm00001e027645 0.8315983503141816 99 Zm00001e033372_P001 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 1096.0) Zm00001e033372 0.8300462212757626 71 Zm00001e000530_P004 no hits & (original description: none) Zm00001e000530 0.8294189818838884 72 Zm00001e003142_P002 no hits & (original description: none) Zm00001e003142 0.8289521469511102 73 Zm00001e021762_P003 co-chaperone (Hsp40) Zm00001e021762 0.8287959979501233 74 Zm00001e014199_P004 no hits & (original description: none) Zm00001e014199 0.8275906395447462 82 Zm00001e012081_P002 no hits & (original description: none) Zm00001e012081 0.8269941132924061 77 Zm00001e032571_P001 non-proteolytic core component ClpR of chloroplast Clp-type protease complex CLPR1, SVR2, NCLPP5, Zm00001e032571 0.8265960670081505 78 Zm00001e039244_P001 no hits & (original description: none) Zm00001e039244 0.8263951888833881 79 Zm00001e021412_P001 FSD2-interacting component of plastid-encoded RNA polymerase Zm00001e021412 0.8257886167581174 80 Zm00001e006243_P001 RH3 plastidial RNA basal splicing factor emb1138, Zm00001e006243 0.8257471212614564 81 Zm00001e040778_P001 chaperone component ClpC of chloroplast Clp-type protease complex HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, Zm00001e040778 0.8251647182259804 84 Zm00001e025738_P001 component SUF-D of plastidial SUF system assembly phase NAP6, ATNAP6, Zm00001e025738 0.8250561832754861 92 Zm00001e019511_P001 ribonuclease (RNC1) Zm00001e019511 0.8215617880762329 90 Zm00001e019402_P001 Thioredoxin-like fold domain-containing protein MRL7 homolog, chloroplastic OS=Oryza sativa subsp. japonica (sp|q5qls7|mrl7_orysj : 402.0) Zm00001e019402 0.8215551425562292 91 Zm00001e000479_P003 glutathione reductase (GR) GR, EMB2360, ATGR2, Zm00001e000479 0.8206605148783471 92 Zm00001e023958_P002 No annotation Zm00001e023958 0.8194050407511513 93 Zm00001e011483_P001 valine-tRNA ligase EMB2247, Zm00001e011483 0.8169476106415835 94 Zm00001e017288_P001 non-proteolytic core component ClpR of chloroplast Clp-type protease complex CLPR4, Zm00001e017288 0.8159960477863313 95 Zm00001e000706_P004 methionine-tRNA ligase OVA1, Zm00001e000706 0.8151899924459944 96 Zm00001e024183_P002 component GatB of glutamyl-tRNA-dependent amidotransferase complex GATB, Zm00001e024183 0.8129939396508086 99 Zm00001e014078_P003 Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. indica (sp|a2x208|oep80_orysi : 1025.0) OEP80, EMB213, TOC75, ATOEP80, Zm00001e014078 0.8128290983961476 100