Sequence Description Alias PCC hrr Zm00001e016129_P001 aspartate aminotransferase AAT3, ATAAT1, ASP5, Zm00001e016129 0.9407770878324865 2 Zm00001e031643_P002 pyruvate orthophosphate dikinase PPDK, Zm00001e031643 0.9354402855769398 5 Zm00001e006347_P003 no hits & (original description: none) Zm00001e006347 0.9321684886183653 3 Zm00001e003885_P001 NADPH-dependent malate dehydrogenase Zm00001e003885 0.9317035440201218 11 Zm00001e006798_P002 no hits & (original description: none) Zm00001e006798 0.9229941658025921 5 Zm00001e018573_P001 ferredoxin-NADP oxidoreductase FNR1, ATLFNR1, Zm00001e018573 0.9205398935602517 14 Zm00001e009286_P001 metal-citrate complex transporter (FRD) Zm00001e009286 0.9176561491183908 8 Zm00001e020360_P004 Carbonic anhydrase, chloroplastic OS=Hordeum vulgare (sp|p40880|cahc_horvu : 365.0) BCA4, CA4, ATBCA4, Zm00001e020360 0.9153532816362897 8 Zm00001e036696_P002 ferredoxin-NADP oxidoreductase FNR1, ATLFNR1, Zm00001e036696 0.9147107495749974 24 Zm00001e018973_P002 no hits & (original description: none) Zm00001e018973 0.9145299794473152 15 Zm00001e036513_P002 no hits & (original description: none) Zm00001e036513 0.9113415998768455 46 Zm00001e034859_P002 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana (sp|q8lap6|pap12_arath : 347.0) Zm00001e034859 0.9102402045930901 12 Zm00001e019168_P001 cytosolic fructose-1,6-bisphosphatase. cytosolic fructose-1,6-bisphosphatase Zm00001e019168 0.9089594978636488 14 Zm00001e037129_P002 PEP carboxylase PPC2, ATPPC2, Zm00001e037129 0.9086956869679994 14 Zm00001e014138_P001 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana (sp|f4k410|svr3_arath : 1030.0) Zm00001e014138 0.9085690372332179 21 Zm00001e002440_P001 no hits & (original description: none) NARA5, Zm00001e002440 0.9082390135558848 16 Zm00001e000560_P001 no hits & (original description: none) Zm00001e000560 0.9072529423798362 17 Zm00001e003972_P002 HCF244 protein involved in PS-II assembly Zm00001e003972 0.9067586708010799 18 Zm00001e013465_P002 LPA3 protein involved in PS-II assembly LPA3, Zm00001e013465 0.9013565659707958 45 Zm00001e004299_P002 phosphometabolite transporter (TPT|PPT|GPT|XPT) CUE1, PPT, ARAPPT, Zm00001e004299 0.9012328227229263 35 Zm00001e041208_P001 monogalactosyldiacylglycerol lipase (HIL1) Zm00001e041208 0.9011373235683529 21 Zm00001e030737_P001 glutathione peroxidase GPX1, ATGPX1, Zm00001e030737 0.9009203358539415 22 Zm00001e028994_P002 adaptor component ClpF of chloroplast Clp-type protease complex Zm00001e028994 0.9004805389498521 23 Zm00001e004293_P003 photosynthetic acclimation APE acclimation factor APE1, Zm00001e004293 0.9003044854514973 24 Zm00001e008271_P001 Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana (sp|q9fvr6|y1222_arath : 392.0) Zm00001e008271 0.9000971638451474 25 Zm00001e021683_P001 basal transcription factor (Sigma) SIGB, SIG2, SIGA, SIG1, RPOD1, Zm00001e021683 0.8991888931135436 26 Zm00001e014904_P001 protein kinase (ABC1) ATATH13, OSA1, ATH13, ATOSA1, Zm00001e014904 0.8981112869752481 27 Zm00001e021319_P001 protein kinase (ABC1) Zm00001e021319 0.8972999749599843 28 Zm00001e009481_P003 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana (sp|q94a68|y1669_arath : 94.4) Zm00001e009481 0.8961463040200263 47 Zm00001e002492_P002 glycerate:glycolate transporter. glycerate:glycolate transporter (PLGG1) Zm00001e002492 0.8938706311136608 50 Zm00001e038183_P001 Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana (sp|o80934|y2766_arath : 86.7) Zm00001e038183 0.8932228533419233 31 Zm00001e040182_P002 no hits & (original description: none) ENH1, Zm00001e040182 0.8917005671573804 32 Zm00001e029691_P004 glycerate kinase Zm00001e029691 0.8913504284506992 33 Zm00001e003238_P001 MSBQ-methyltransferase (APG1). MPBQ-methyltransferase (VTE3) IEP37, E37, APG1, VTE3, Zm00001e003238 0.8909586522045957 34 Zm00001e027087_P002 ER body formation factor (NAIP) Zm00001e027087 0.8908724520067804 35 Zm00001e040395_P001 no hits & (original description: none) Zm00001e040395 0.8908539881883601 36 Zm00001e026715_P001 no hits & (original description: none) Zm00001e026715 0.8907546090640349 37 Zm00001e000405_P004 solanesyl diphosphate synthase (SPS1/2) SPS2, Zm00001e000405 0.8902542544065555 38 Zm00001e032470_P003 small solute transporter (BASS) Zm00001e032470 0.889358904911651 39 Zm00001e035402_P001 threonine-tRNA ligase EMB2761, Zm00001e035402 0.8889972105337286 54 Zm00001e036226_P001 subunit beta of ferredoxin-dependent thioredoxin reductase (FTR) complex Zm00001e036226 0.8882291588489015 42 Zm00001e032028_P001 phosphoglycerate kinase. phosphoglycerate kinase. phosphoglycerate kinase Zm00001e032028 0.88582053960581 51 Zm00001e020739_P001 photosynthetic acclimation PPH1/TAP38 phosphatase TAP38, PPH1, Zm00001e020739 0.885700741739751 48 Zm00001e019137_P001 non-photochemical quenching PsbS protein NPQ4, PSBS, Zm00001e019137 0.8855603795521378 44 Zm00001e041325_P001 EF-G translation elongation factor ATSCO1/CPEF-G, SCO1, ATSCO1, Zm00001e041325 0.8852312780440996 45 Zm00001e017970_P002 proton:potassium cation antiporter (KEA) ATKEA3, KEA3, Zm00001e017970 0.8851502837768804 46 Zm00001e004189_P001 no hits & (original description: none) Zm00001e004189 0.8842319259919371 74 Zm00001e006067_P001 Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana (sp|q8w496|ptc52_arath : 514.0) TIC55-IV, ACD1-LIKE, PTC52, Zm00001e006067 0.8831569577553001 48 Zm00001e012571_P001 DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana (sp|q84lk0|msh1_arath : 84.7) Zm00001e012571 0.8830774859549428 49 Zm00001e018788_P001 Psb33 protein involved in PS-II assembly Zm00001e018788 0.8829616579268085 50 Zm00001e032895_P001 MET1 protein involved in PS-II assembly ZKT, Zm00001e032895 0.8818953700006288 51 Zm00001e031121_P001 Probable GTP diphosphokinase CRSH1, chloroplastic OS=Oryza sativa subsp. japonica (sp|q6atb4|crsh1_orysj : 800.0) ATCRSH, CRSH, Zm00001e031121 0.880525614010924 52 Zm00001e028504_P001 component SNAPC3/SRD2 of SNAP snRNA transcription factor complex Zm00001e028504 0.8798805918094913 53 Zm00001e011669_P002 Prolycopene isomerase, chloroplastic OS=Daucus carota (sp|q2vex9|crtso_dauca : 190.0) Zm00001e011669 0.8765851286887129 55 Zm00001e025200_P002 Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica (sp|b9f2u5|gufp_orysj : 1112.0) Zm00001e025200 0.8762449675051776 57 Zm00001e028282_P003 chlorophyllide a oxygenase CH1, ATCAO, CAO, Zm00001e028282 0.875495146139905 57 Zm00001e020031_P003 No annotation Zm00001e020031 0.8737801764608794 58 Zm00001e024909_P003 no hits & (original description: none) Zm00001e024909 0.8736422030591291 63 Zm00001e021482_P001 UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana (sp|q9lvj0|uvb31_arath : 173.0) Zm00001e021482 0.8731934062506513 77 Zm00001e029155_P001 adenylate kinase AMK2, Zm00001e029155 0.8727688969840411 61 Zm00001e018836_P001 no hits & (original description: none) Zm00001e018836 0.8724709036224058 62 Zm00001e006297_P002 no hits & (original description: none) Zm00001e006297 0.8715955946443735 63 Zm00001e009192_P002 assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II) CcdA, Zm00001e009192 0.8715409367014819 64 Zm00001e028295_P001 ferredoxin-NADP oxidoreductase FNR1, ATLFNR1, Zm00001e028295 0.8713833392031931 65 Zm00001e034632_P004 no hits & (original description: none) Zm00001e034632 0.8697537547775985 67 Zm00001e041886_P001 Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana (sp|q8w485|y5010_arath : 216.0) Zm00001e041886 0.869259074571375 68 Zm00001e001198_P005 basal transcription factor (Sigma) ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1, Zm00001e001198 0.8689278905108702 91 Zm00001e020568_P001 OHP2 LHC-related protein OHP2, Zm00001e020568 0.8685839750148004 90 Zm00001e028161_P002 no hits & (original description: none) Zm00001e028161 0.8680922554728059 90 Zm00001e006628_P001 Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana (sp|q8s9m1|pap13_arath : 293.0) Zm00001e006628 0.867308899980853 72 Zm00001e013206_P002 HCF173 protein involved in PS-II assembly HCF173, Zm00001e013206 0.8671124182896365 73 Zm00001e019889_P001 phenylalanine-tRNA ligase Zm00001e019889 0.8668312732246134 74 Zm00001e002845_P002 no hits & (original description: none) Zm00001e002845 0.8659363021484163 86 Zm00001e007005_P001 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana (sp|q941d3|pap8_arath : 233.0) Zm00001e007005 0.8653252253485347 76 Zm00001e034825_P001 no hits & (original description: none) Zm00001e034825 0.8648225192923152 77 Zm00001e034806_P002 no hits & (original description: none) Zm00001e034806 0.8647144618938617 78 Zm00001e035340_P001 Pheophytinase, chloroplastic OS=Arabidopsis thaliana (sp|q9ffz1|pph_arath : 98.6) Zm00001e035340 0.8643542201825292 79 Zm00001e014804_P002 no hits & (original description: none) Zm00001e014804 0.8642966510834584 82 Zm00001e023828_P001 no hits & (original description: none) Zm00001e023828 0.8638802722610242 81 Zm00001e011297_P001 ABC transporter F family member 5 OS=Arabidopsis thaliana (sp|q9lv93|ab5f_arath : 712.0) ATGCN5, GCN5, Zm00001e011297 0.8636611468051567 82 Zm00001e039341_P002 no hits & (original description: none) Zm00001e039341 0.8635767652598427 83 Zm00001e032314_P001 photosynthetic acclimation STN7 kinase. protein kinase (STN) STN7, Zm00001e032314 0.8621858639642211 84 Zm00001e005645_P001 no hits & (original description: none) Zm00001e005645 0.862184757896393 85 Zm00001e016305_P006 no hits & (original description: none) Zm00001e016305 0.8617703745105909 86 Zm00001e023452_P001 plastidial protease (SppA) SPPA1, SPPA, Zm00001e023452 0.8616209714408309 87 Zm00001e022396_P002 no hits & (original description: none) Zm00001e022396 0.86157668828654 88 Zm00001e005556_P001 no hits & (original description: none) Zm00001e005556 0.86138374607441 89 Zm00001e036073_P002 G2-like GARP transcription factor GPRI2, ATGLK2, GLK2, Zm00001e036073 0.8607908603953282 90 Zm00001e031798_P004 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1f6|dgp3_arath : 465.0) Zm00001e031798 0.8606937993613238 91 Zm00001e036697_P002 no hits & (original description: none) Zm00001e036697 0.8596849791597159 92 Zm00001e030132_P002 phytoene synthase (PSY) PSY, Zm00001e030132 0.8593472333276717 93 Zm00001e010003_P001 dicarboxylate:malate antiporter (DIT) DIT2.1, DCT, Zm00001e010003 0.85907496611384 94 Zm00001e035597_P001 no hits & (original description: none) Zm00001e035597 0.8581885534837305 95 Zm00001e003387_P005 no hits & (original description: none) Zm00001e003387 0.8571645167790116 98 Zm00001e032359_P001 Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana (sp|q9lu21|pnsb3_arath : 123.0) Zm00001e032359 0.8564465489114024 99 Zm00001e021048_P001 Senescence-associated protein OSA15, chloroplastic OS=Oryza sativa subsp. japonica (sp|q65xf2|osa15_orysj : 565.0) Zm00001e021048 0.8564247105606074 100