Sequence Description Alias PCC hrr Zm00001e003885_P001 NADPH-dependent malate dehydrogenase Zm00001e003885 0.9532462778166556 2 Zm00001e003972_P002 HCF244 protein involved in PS-II assembly Zm00001e003972 0.9435217377469561 2 Zm00001e002440_P001 no hits & (original description: none) NARA5, Zm00001e002440 0.9406267649929351 3 Zm00001e004189_P001 no hits & (original description: none) Zm00001e004189 0.9397727474142274 4 Zm00001e019037_P002 no hits & (original description: none) Zm00001e019037 0.9306374384527919 5 Zm00001e016129_P001 aspartate aminotransferase AAT3, ATAAT1, ASP5, Zm00001e016129 0.9285506057258112 6 Zm00001e018788_P001 Psb33 protein involved in PS-II assembly Zm00001e018788 0.9285151543192333 7 Zm00001e027714_P001 phosphate transporter (PHT4) ANTR2, PHT4;4, Zm00001e027714 0.9271635112787993 8 Zm00001e025307_P001 no hits & (original description: none) Zm00001e025307 0.9262658040266672 9 Zm00001e036513_P002 no hits & (original description: none) Zm00001e036513 0.9260892142159637 13 Zm00001e009192_P002 assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II) CcdA, Zm00001e009192 0.924439296014401 11 Zm00001e006798_P002 no hits & (original description: none) Zm00001e006798 0.9229245279886095 12 Zm00001e015029_P001 HHL1 protein involved in PS-II assembly Zm00001e015029 0.9202375280736187 13 Zm00001e019889_P001 phenylalanine-tRNA ligase Zm00001e019889 0.9193264974769827 14 Zm00001e028161_P002 no hits & (original description: none) Zm00001e028161 0.9172219538576535 15 Zm00001e021069_P003 PrfA-type translation peptide chain release factor APG3, Zm00001e021069 0.9165284282286071 18 Zm00001e035191_P002 no hits & (original description: none) Zm00001e035191 0.916185714892719 17 Zm00001e009193_P002 no hits & (original description: none) Zm00001e009193 0.9161488498717115 21 Zm00001e035750_P004 NADPH-dependent thioredoxin reductase NTRC, Zm00001e035750 0.9159016714691179 20 Zm00001e000405_P004 solanesyl diphosphate synthase (SPS1/2) SPS2, Zm00001e000405 0.9127701749101305 20 Zm00001e034632_P004 no hits & (original description: none) Zm00001e034632 0.9125828589453561 21 Zm00001e035340_P001 Pheophytinase, chloroplastic OS=Arabidopsis thaliana (sp|q9ffz1|pph_arath : 98.6) Zm00001e035340 0.9119451275471908 22 Zm00001e036226_P001 subunit beta of ferredoxin-dependent thioredoxin reductase (FTR) complex Zm00001e036226 0.9097667924686516 23 Zm00001e016906_P001 component ALB3 of thylakoid membrane SRP insertion system ALB3, Zm00001e016906 0.9084305672555967 24 Zm00001e035402_P001 threonine-tRNA ligase EMB2761, Zm00001e035402 0.9080562002133371 25 Zm00001e039381_P004 component cpSRP54 of thylakoid membrane SRP insertion system 54CP, SRP54CP, CPSRP54, FFC, Zm00001e039381 0.9072740956003367 40 Zm00001e022396_P002 no hits & (original description: none) Zm00001e022396 0.9067575456680573 27 Zm00001e030125_P002 HCF136 protein involved in PS-II assembly HCF136, Zm00001e030125 0.9066621724599468 28 Zm00001e036696_P002 ferredoxin-NADP oxidoreductase FNR1, ATLFNR1, Zm00001e036696 0.9047033826681936 38 Zm00001e002928_P003 shikimate kinase ATSKL1, SKL1, Zm00001e002928 0.9040974306388719 30 Zm00001e024787_P001 no hits & (original description: none) Zm00001e024787 0.9035061280943131 31 Zm00001e000560_P001 no hits & (original description: none) Zm00001e000560 0.9033597253270491 32 Zm00001e025811_P001 no hits & (original description: none) Zm00001e025811 0.9031513612673565 33 Zm00001e019168_P001 cytosolic fructose-1,6-bisphosphatase. cytosolic fructose-1,6-bisphosphatase Zm00001e019168 0.9020070924104868 34 Zm00001e011158_P001 no hits & (original description: none) Zm00001e011158 0.9017693754373823 35 Zm00001e015008_P001 EF-Tu translation elongation factor ATRAB8D, ATRABE1B, RABE1b, Zm00001e015008 0.9014225643481206 36 Zm00001e018836_P001 no hits & (original description: none) Zm00001e018836 0.9009413822380917 37 Zm00001e040182_P002 no hits & (original description: none) ENH1, Zm00001e040182 0.9003589781991683 38 Zm00001e023452_P001 plastidial protease (SppA) SPPA1, SPPA, Zm00001e023452 0.9001234667001994 39 Zm00001e014138_P001 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana (sp|f4k410|svr3_arath : 1030.0) Zm00001e014138 0.9001102197711875 40 Zm00001e006980_P003 M24-class methionyl aminopeptidase (MAP1) MAP1C, MAP1B, Zm00001e006980 0.8993886993004607 41 Zm00001e020031_P003 No annotation Zm00001e020031 0.8992809203045331 42 Zm00001e020568_P001 OHP2 LHC-related protein OHP2, Zm00001e020568 0.8988659703432764 43 Zm00001e039903_P001 component SecY1 of thylakoid membrane Sec1 translocation system SCY1, Zm00001e039903 0.898355641871541 44 Zm00001e031540_P002 PrfB-type translation peptide chain release factor Zm00001e031540 0.89784677036837 45 Zm00001e013465_P002 LPA3 protein involved in PS-II assembly LPA3, Zm00001e013465 0.8961559601160981 61 Zm00001e041772_P001 no hits & (original description: none) Zm00001e041772 0.8961463040200263 47 Zm00001e001457_P001 plastidial RNA transcript stability factor HCF107, Zm00001e001457 0.896055053091386 48 Zm00001e026075_P001 manganese/calcium cation transporter (BICAT) Zm00001e026075 0.8958758445712914 49 Zm00001e019137_P001 non-photochemical quenching PsbS protein NPQ4, PSBS, Zm00001e019137 0.8954915264500959 50 Zm00001e028569_P001 VIPP protein involved in plastid membrane fusion PTAC4, VIPP1, Zm00001e028569 0.8952534060920326 51 Zm00001e031798_P004 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1f6|dgp3_arath : 465.0) Zm00001e031798 0.8949748234369184 52 Zm00001e008148_P001 no description available(sp|q0jd85|pap7_orysj : 338.0) Zm00001e008148 0.8947536276923181 53 Zm00001e016305_P006 no hits & (original description: none) Zm00001e016305 0.8946759635329866 54 Zm00001e001198_P005 basal transcription factor (Sigma) ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1, Zm00001e001198 0.8938845217119655 55 Zm00001e005556_P001 no hits & (original description: none) Zm00001e005556 0.8929263709014905 56 Zm00001e018573_P001 ferredoxin-NADP oxidoreductase FNR1, ATLFNR1, Zm00001e018573 0.8926458354717647 57 Zm00001e028596_P001 no hits & (original description: none) Zm00001e028596 0.8920228652546377 58 Zm00001e012536_P001 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana (sp|q56y42|plr1_arath : 536.0) Zm00001e012536 0.8913061119469564 59 Zm00001e021681_P001 assembly factor CRR6 involved in NDH complex assembly CRR6, Zm00001e021681 0.8912468577181719 60 Zm00001e018980_P001 VIPP protein involved in plastid membrane fusion PTAC4, VIPP1, Zm00001e018980 0.8908358014992209 61 Zm00001e016156_P001 co-chaperone (Hsp40) Zm00001e016156 0.8907614819120604 62 Zm00001e030737_P001 glutathione peroxidase GPX1, ATGPX1, Zm00001e030737 0.8891500818603058 63 Zm00001e004293_P003 photosynthetic acclimation APE acclimation factor APE1, Zm00001e004293 0.8887304082990464 64 Zm00001e007911_P001 no hits & (original description: none) Zm00001e007911 0.8880337983612802 65 Zm00001e031570_P001 component psRPL1 of large ribosomal subunit proteome Zm00001e031570 0.887786947646369 66 Zm00001e003750_P001 no hits & (original description: none) Zm00001e003750 0.887238086872982 67 Zm00001e011960_P001 HCF164 protein involved in cytochrome b6/f complex assembly HCF164, Zm00001e011960 0.8871788270264045 68 Zm00001e013732_P001 no hits & (original description: none) Zm00001e013732 0.8871064551875036 69 Zm00001e011669_P002 Prolycopene isomerase, chloroplastic OS=Daucus carota (sp|q2vex9|crtso_dauca : 190.0) Zm00001e011669 0.886686334485695 70 Zm00001e039091_P001 cyclin (CYL1) Zm00001e039091 0.8862786084782731 71 Zm00001e032895_P001 MET1 protein involved in PS-II assembly ZKT, Zm00001e032895 0.8862783938183275 72 Zm00001e009286_P001 metal-citrate complex transporter (FRD) Zm00001e009286 0.8857826483081416 73 Zm00001e002492_P002 glycerate:glycolate transporter. glycerate:glycolate transporter (PLGG1) Zm00001e002492 0.8856131507627327 74 Zm00001e003238_P001 MSBQ-methyltransferase (APG1). MPBQ-methyltransferase (VTE3) IEP37, E37, APG1, VTE3, Zm00001e003238 0.8853400415279038 75 Zm00001e037753_P001 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes VAR2, FTSH2, Zm00001e037753 0.8848134998529996 76 Zm00001e036036_P002 alanine-tRNA ligase EMB86, EMB1030, EMB263, Zm00001e036036 0.8845287908796008 77 Zm00001e020730_P001 phosphate transporter (PHT4) ANTR2, PHT4;4, Zm00001e020730 0.884423227560732 78 Zm00001e004299_P002 phosphometabolite transporter (TPT|PPT|GPT|XPT) CUE1, PPT, ARAPPT, Zm00001e004299 0.8837285423082657 79 Zm00001e010571_P001 protein folding catalyst Zm00001e010571 0.8831074261290066 80 Zm00001e023814_P002 Protein DCL, chloroplastic OS=Solanum lycopersicum (sp|q42463|dcl_sollc : 219.0) Zm00001e023814 0.8826248221339404 81 Zm00001e002845_P002 no hits & (original description: none) Zm00001e002845 0.8825799137403673 82 Zm00001e041325_P001 EF-G translation elongation factor ATSCO1/CPEF-G, SCO1, ATSCO1, Zm00001e041325 0.8814766634941064 83 Zm00001e005221_P003 no hits & (original description: none) Zm00001e005221 0.8811866537064628 84 Zm00001e031643_P002 pyruvate orthophosphate dikinase PPDK, Zm00001e031643 0.8807565526575063 85 Zm00001e018395_P002 no hits & (original description: none) Zm00001e018395 0.8804149127862785 86 Zm00001e010796_P003 indole-3-acetamide hydrolase TOC64-I, ATTOC64-I, AMI1, ATAMI1, Zm00001e010796 0.8803041161843994 87 Zm00001e028994_P002 adaptor component ClpF of chloroplast Clp-type protease complex Zm00001e028994 0.8796277287150052 88 Zm00001e026254_P001 no hits & (original description: none) Zm00001e026254 0.879103869289213 89 Zm00001e008271_P001 Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana (sp|q9fvr6|y1222_arath : 392.0) Zm00001e008271 0.8788063323560009 90 Zm00001e016946_P003 plastidial protease (EGY) ATEGY2, EGY2, Zm00001e016946 0.8785800496248845 91 Zm00001e002454_P001 Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica (sp|q7xbw5|pap3_orysj : 341.0) Zm00001e002454 0.8775327135292625 92 Zm00001e022269_P001 no hits & (original description: none) Zm00001e022269 0.8767698168493399 93 Zm00001e001323_P001 no hits & (original description: none) Zm00001e001323 0.8758500011919486 94 Zm00001e012569_P001 Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana (sp|q8w4f1|pap10_arath : 301.0) Zm00001e012569 0.8755220265466224 95 Zm00001e007896_P002 no hits & (original description: none) Zm00001e007896 0.8748133001709197 96 Zm00001e032028_P001 phosphoglycerate kinase. phosphoglycerate kinase. phosphoglycerate kinase Zm00001e032028 0.874576893384809 97 Zm00001e006957_P001 no hits & (original description: none) Zm00001e006957 0.8741925377945042 98 Zm00001e008701_P001 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q9lvv5|tl15b_arath : 266.0) Zm00001e008701 0.8738853559377812 99 Zm00001e030450_P001 Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana (sp|q0wpt7|y2104_arath : 395.0) Zm00001e030450 0.8736691744401535 100