Sequence Description Alias PCC hrr GSVIVT01016353001 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component 0.8387835345960348 19 GSVIVT01008944001 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.8313954138436197 28 GSVIVT01007703001 Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana MOS1 0.8144685703431924 47 GSVIVT01033231001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80 0.813818709827989 88 GSVIVT01019046001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component 0.8031297828909814 49 GSVIVT01030107001 Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana 0.7978912404774147 27 GSVIVT01011619001 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2 0.796643193920804 79 GSVIVT01018223001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase RDO4, HUB1 0.794124822581312 77 GSVIVT01023517001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor PKDM7D 0.794060436190767 45 GSVIVT01035878001 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.7918484077844884 60 GSVIVT01011020001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component SCC3, ATSCC3 0.7903164042573194 43 GSVIVT01035288001 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase 0.7902337838305431 27 GSVIVT01003381001 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component ALA3 0.7900918825469193 82 GSVIVT01015158001 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component 0.7897990073834728 66 GSVIVT01000874001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.787888670778124 45 GSVIVT01009833001 Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana LDL3 0.7872552309266424 31 GSVIVT01036517001 Protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Arabidopsis thaliana 0.7865256749797828 33 GSVIVT01009365001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF4 component TAF4, TAF4B 0.7852302032269994 64 GSVIVT01020543001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2 0.7840939001523104 84 GSVIVT01025385001 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase 0.7823327014249136 48 GSVIVT01012117001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor PKR1, CHR4 0.7820227992123298 58 GSVIVT01035731001 0.7803705654631208 92 GSVIVT01032137001 Protein OBERON 4 OS=Arabidopsis thaliana 0.7792733292429476 51 GSVIVT01017821001 0.7786600284843016 65 GSVIVT01037235001 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component CHR5 0.7772258731850294 75 GSVIVT01008473001 Protein modification.phosphorylation.AGC kinase superfamily.MAST kinase 0.7771315182193167 34 GSVIVT01011972001 Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear lamina.CRWN lamin-like protein LINC3 0.7764022978045948 68 GSVIVT01008805001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component LAZ2, CCR1, ASHH2, EFS, SDG8 0.772945105443328 80 GSVIVT01031951001 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component CHB3, ATSWI3D 0.7725920335869919 33 GSVIVT01014233001 Transcription factor GTE4 OS=Arabidopsis thaliana GTE4 0.7724615584843596 67 GSVIVT01010842001 Flowering time control protein FPA OS=Arabidopsis thaliana FPA 0.7718661945277557 66 GSVIVT01037894001 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor HAT3.1 0.77108725619692 37 GSVIVT01035985001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SR140 snRNP-associated protein 0.7698972352442028 89 GSVIVT01025073001 0.7684868048635162 74 GSVIVT01024445001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.PRC2 histone methylation complex.associated protein factors.PWO histone H3 methylation reader 0.764287969676977 44 GSVIVT01020936001 0.7633728445939527 67 GSVIVT01025465001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component GCT 0.7630639721133454 97 GSVIVT01011809001 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial OS=Arabidopsis thaliana 0.7623857880250734 47 GSVIVT01035328001 0.7609927851289618 50 GSVIVT01019397001 0.7604730091409176 51 GSVIVT01013247001 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein UPF1, ATUPF1, LBA1 0.7600716918443988 74 GSVIVT01019675001 0.7583540031939722 89 GSVIVT01023952001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein 0.7574432401419704 88 GSVIVT01020528001 Protein modification.phosphorylation.atypical kinase families.TAF kinase HAF01, HAC13, TAF1, HAF1, GTD1 0.756623284841012 57 GSVIVT01033783001 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component 0.7565967972088848 58 GSVIVT01000179001 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana HOS15 0.7554318088738455 60 GSVIVT01034941001 emb1441 0.7554028485545852 92 GSVIVT01023587001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor 0.7525434347600424 63 GSVIVT01020008001 Cullin-3A OS=Arabidopsis thaliana ATCUL3A, ATCUL3, CUL3A, CUL3 0.7519490393830471 82 GSVIVT01004000001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component ATRAD21.3, SYN4 0.7517939821699618 97 GSVIVT01008230001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component TAF2 0.7508156404141947 95 GSVIVT01009936001 0.7503085308467207 72 GSVIVT01036797001 0.7499854221646958 70 GSVIVT01029553001 Pumilio homolog 5 OS=Arabidopsis thaliana PUM5, APUM5 0.748599934122392 73 GSVIVT01009244001 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component 0.7482736712894946 74 GSVIVT01038091001 0.7480228431834989 81 GSVIVT01017921001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor ATCHR12 0.7468089582190679 78 GSVIVT01034370001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Ris1 chromatin remodeling factor 0.7466675169553464 99 GSVIVT01012049001 RNA biosynthesis.transcriptional activation.HUA2 transcription factor HUA2 0.7464192337695807 96 GSVIVT01020670001 Transcription factor GTE4 OS=Arabidopsis thaliana GTE4 0.7457543930840982 82 GSVIVT01022126001 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.7447753342274014 85 GSVIVT01014643001 0.7443506612014595 86 GSVIVT01012646001 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component PCFS4 0.7420695837532301 90 GSVIVT01035021001 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4 phosphatase complex.regulatory component (PSY2L) 0.7419232997306824 91 GSVIVT01020280001 RNA biosynthesis.RNA polymerase II-dependent transcription.phosphorylation/dephosphorylation.polymerase-II kinase complex (CTDK-I).cyclin-type regulator component CYCT1;4 0.7416505211801578 93 GSVIVT01016617001 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter PGP20 0.7412110037167667 95 GSVIVT01005913001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component SUVH5, SGD9 0.741003335241149 96