Sequence Description Alias PCC hrr GSVIVT01038078001 Photosynthesis.photorespiration.glycolate oxidase 0.9773362296117442 1 GSVIVT01016373001 Photosynthesis.calvin cycle.sedoheptulose-1,7-bisphosphatase SBPASE 0.974668099812935 2 GSVIVT01011555001 Photosynthesis.calvin cycle.phosphoribulokinase PRK 0.9641480474261791 3 GSVIVT01012724001 ATP synthase gamma chain, chloroplastic OS=Pisum sativum DUO3 0.9594848183915399 6 GSVIVT01028249001 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1 0.9572102922290895 6 GSVIVT01002784001 Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana SIP2, AtSIP2 0.9568827786076541 6 GSVIVT01024261001 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGB, SIG2, SIGA, SIG1, RPOD1 0.9565342350434812 7 GSVIVT01019074001 Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase scpl20 0.9544440464068839 8 GSVIVT01017376001 0.9540420379468733 9 GSVIVT01004084001 Photosynthesis.photorespiration.aminotransferases.glutamate-glyoxylate transaminase GGT2, AOAT2 0.9532598786154347 10 GSVIVT01013403001 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB 0.9529666990102625 12 GSVIVT01031393001 2-carboxy-D-arabinitol-1-phosphatase OS=Triticum aestivum 0.9516270475881398 12 GSVIVT01022409001 Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera 0.9515999531594632 13 GSVIVT01016110001 ACT domain-containing protein ACR11 OS=Arabidopsis thaliana 0.9504508229546871 17 GSVIVT01030279001 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metal-citrate complex transporter (FRD-type) 0.9501680876462069 15 GSVIVT01038182001 0.9501267333842243 16 GSVIVT01032129001 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana ATAB2 0.9500375111043521 17 GSVIVT01036965001 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.peroxisomal NAD-dependent malate dehydrogenase PMDH1 0.9489459755579069 18 GSVIVT01016062001 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica 0.9445674816792801 19 GSVIVT01024905001 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC16 component PTAC16 0.9436095444220559 20 GSVIVT01033621001 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase GLU1, FD-GOGAT, GLS1, GLUS 0.9430076080448212 21 GSVIVT01001533001 0.9429701379224942 22 GSVIVT01007638001 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor ATRAB8D, ATRABE1B, RABE1b 0.9429028853795811 23 GSVIVT01019803001 0.9429001287601015 24 GSVIVT01023918001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase EMB86, EMB1030, EMB263 0.9426726682717325 25 GSVIVT01010979001 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor APG3 0.9411716164288907 26 GSVIVT01035408001 Photosynthesis.photorespiration.glycine cleavage system.P-protein glycine dehydrogenase component AtGLDP1, GLDP1 0.9393766016102116 27 GSVIVT01009624001 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO OEC33, PSBO-2, PSBO2 0.9390055012290844 28 GSVIVT01003859001 Photosynthesis.photorespiration.serine hydroxymethyltransferase STM, SHM1, SHMT1 0.9378417483097403 29 GSVIVT01031251001 Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana LPA66 0.9373018896641256 30 GSVIVT01008723001 High mobility group B protein 9 OS=Arabidopsis thaliana 0.9372178172008273 31 GSVIVT01005667001 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA3, KEA3 0.9368324039071833 32 GSVIVT01015424001 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component HCF101 0.9356870062253819 33 GSVIVT01018072001 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.MPBQ methyltransferase (VTE3) IEP37, E37, APG1, VTE3 0.9355962806450505 34 GSVIVT01035330001 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGC, SIG3 0.9354138129534196 35 GSVIVT01019890001 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component PGR5-LIKE A 0.9347978065948003 36 GSVIVT01011952001 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN7 0.9347232365008128 37 GSVIVT01032942001 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPA-2 0.9340366952577387 41 GSVIVT01011082001 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CSP41A 0.9333605867668241 80 GSVIVT01025541001 Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana 0.9333424455878918 40 GSVIVT01012702001 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component 0.9326773118086891 42 GSVIVT01022128001 Phytohormones.abscisic acid.synthesis.ABA1 zeaxanthin epoxidase ABA1, IBS3, ATABA1, ZEP, NPQ2, LOS6, ATZEP 0.9322974282097098 42 GSVIVT01015957001 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component NDH48, NDF1 0.9322830479559526 60 GSVIVT01019072001 0.9321717522714046 44 GSVIVT01007572001 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 0.9318640901908369 45 GSVIVT01024637001 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.SLP phosphatase 0.9316092963860582 46 GSVIVT01007976001 Photosynthesis.calvin cycle.phosphopentose epimerase RPE, EMB2728 0.9313205013208458 47 GSVIVT01032196001 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.9296672383322716 48 GSVIVT01012045001 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136 0.9291173037491125 49 GSVIVT01021114001 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.TPT phosphometabolite transporter TPT, APE2 0.92832078909847 50 GSVIVT01032453001 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.monodehydroascorbate reductase (MDAR) ATMDAR4, MDAR4 0.9278745750227778 51 GSVIVT01026405001 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.VDE violaxanthin de-epoxidase NPQ1, AVDE1 0.9272122285541655 52 GSVIVT01011966001 Cytoskeleton.cp-actin-dependent plastid movement.CHUP motility factor CHUP1 0.927171794449377 53 GSVIVT01018772001 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase FNR1, ATLFNR1 0.926986483048233 77 GSVIVT01016774001 0.9264798979584328 55 GSVIVT01038572001 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PPH1/TAP38 phosphatase TAP38, PPH1 0.9262709026077092 56 GSVIVT01024012001 Photosynthesis.photorespiration.hydroxypyruvate reductase HPR, ATHPR1 0.9262207293206566 57 GSVIVT01011085001 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana FZL 0.9252394287515658 58 GSVIVT01023933001 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.9246669401836597 59 GSVIVT01015471001 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana 0.9242068535402809 60 GSVIVT01021520001 Photosynthesis.photorespiration.glycolate oxidase 0.9231248239866979 61 GSVIVT01032980001 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB1 component CCB1 0.9221024318210814 62 GSVIVT01025799001 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst ROF2, FKBP65, ATFKBP65 0.9220102450400589 63 GSVIVT01035869001 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit b_ 0.9219964385463715 64 GSVIVT01010483001 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa2-type component LHCA2 0.9215833328956039 65 GSVIVT01024526001 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhN component 0.9192033582957685 66 GSVIVT01010628001 0.9189935322684686 67 GSVIVT01005201001 Probable 2-carboxy-D-arabinitol-1-phosphatase OS=Arabidopsis thaliana 0.9189789240656746 68 GSVIVT01029984001 Solute transport.carrier-mediated transport.PLGG1 glycerate:glycolate transporter 0.9187968251671237 75 GSVIVT01017911001 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase APL1, ADG2 0.9177527160323812 70 GSVIVT01036773001 Cellular respiration.glycolysis.plastidial glycolysis.phosphoglycerate kinase 0.9167822403350202 71 GSVIVT01031907001 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component 0.9166499439145545 72 GSVIVT01009319001 Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase scpl2 0.916232736650607 73 GSVIVT01035407001 Glycine dehydrogenase (decarboxylating), mitochondrial OS=Solanum tuberosum 0.9162043590947531 74 GSVIVT01016172001 Photosynthesis.calvin cycle.NADPH-dependent malate dehydrogenase 0.9159601072560782 75 GSVIVT01011941001 0.915877549964157 76 GSVIVT01013175001 Photosynthesis.photorespiration.glycine cleavage system.H-protein lipoamide-containing component 0.9158492740264532 93 GSVIVT01034516001 Carbohydrate metabolism.gluconeogenesis.cytosolic fructose-1,6-bisphosphatase 0.9157720576260729 78 GSVIVT01020063001 0.9152773381081507 79 GSVIVT01031632001 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.9146346800009358 80 GSVIVT01021388001 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase 0.9137678067361524 82 GSVIVT01033190001 Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OTP82 0.9134400045070816 85 GSVIVT01012872001 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR6 CRR6 0.9129984668527209 97 GSVIVT01035975001 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana PGR3 0.9116580095000683 87 GSVIVT01020815001 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.9115202073803311 88 GSVIVT01008252001 Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana 0.9114824174391071 89 GSVIVT01037237001 Amino acid metabolism.biosynthesis.aspartate family.asparagine.asparagine aminotransaminase AGT1, SGAT, AGT 0.9109324286642065 90 GSVIVT01008866001 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).PsbS-dependent machinery.PsbS protein NPQ4, PSBS 0.909811598977499 96 GSVIVT01009654001 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase GGPS1 0.9097499654174016 92 GSVIVT01024910001 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase RCA 0.9096831637483195 93 GSVIVT01035858001 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) APX6 0.909474798897535 94 GSVIVT01030436001 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease 0.9092713856240039 95 GSVIVT01029990001 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein PSB29, THF1 0.9092048911620156 96 GSVIVT01032853001 Protein modification.peptide maturation.plastid.EGY protease ATEGY2, EGY2 0.9089154591192667 98 GSVIVT01008106001 0.9087409930157649 98 GSVIVT01027447001 Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana PTAC8, TMP14, PSI-P, PSAP 0.9084477101923276 99 GSVIVT01014837001 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic fructose-bisphosphate aldolase 0.9084102814777966 100