Sequence Description Alias PCC hrr GSVIVT01028249001 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1 0.9577891225124082 5 GSVIVT01005667001 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) ATKEA3, KEA3 0.9538279340232744 2 GSVIVT01015424001 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component HCF101 0.9516769729953373 3 GSVIVT01031253001 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).SOQ1 negative NPQ-regulator protein 0.9515999531594632 13 GSVIVT01036685001 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.9489953497828443 5 GSVIVT01021114001 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.TPT phosphometabolite transporter TPT, APE2 0.9473079971052664 6 GSVIVT01016062001 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica 0.9462431037391383 7 GSVIVT01018072001 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.MPBQ methyltransferase (VTE3) IEP37, E37, APG1, VTE3 0.94471600940449 8 GSVIVT01011085001 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana FZL 0.943647907831003 9 GSVIVT01038078001 Photosynthesis.photorespiration.glycolate oxidase 0.9418461775254482 16 GSVIVT01038182001 0.9396544659340369 11 GSVIVT01016373001 Photosynthesis.calvin cycle.sedoheptulose-1,7-bisphosphatase SBPASE 0.9388176153491112 36 GSVIVT01028992001 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.7-hydroxymethyl chlorophyll(ide) a reductase 0.9374558861736082 13 GSVIVT01031632001 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.9363061322168179 14 GSVIVT01032453001 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.monodehydroascorbate reductase (MDAR) ATMDAR4, MDAR4 0.9353291218835807 15 GSVIVT01032129001 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana ATAB2 0.9345929818884429 25 GSVIVT01030436001 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease 0.9344100216811193 17 GSVIVT01019803001 0.9339119869931231 18 GSVIVT01019542001 0.9327479064003831 19 GSVIVT01019890001 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component PGR5-LIKE A 0.9314821515989423 29 GSVIVT01010979001 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor APG3 0.931169254445782 30 GSVIVT01031393001 2-carboxy-D-arabinitol-1-phosphatase OS=Triticum aestivum 0.9301128373596202 22 GSVIVT01016660001 0.9300076600060041 23 GSVIVT01012724001 ATP synthase gamma chain, chloroplastic OS=Pisum sativum DUO3 0.9293827544901775 70 GSVIVT01024905001 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC16 component PTAC16 0.9287028299769662 25 GSVIVT01004084001 Photosynthesis.photorespiration.aminotransferases.glutamate-glyoxylate transaminase GGT2, AOAT2 0.928360465135085 26 GSVIVT01023694001 Protein TSS OS=Arabidopsis thaliana 0.9269381305869128 27 GSVIVT01035408001 Photosynthesis.photorespiration.glycine cleavage system.P-protein glycine dehydrogenase component AtGLDP1, GLDP1 0.9265900816015099 28 GSVIVT01010628001 0.9263634978149293 29 GSVIVT01030279001 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metal-citrate complex transporter (FRD-type) 0.9257762521745495 30 GSVIVT01033190001 Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OTP82 0.9254674524161072 31 GSVIVT01023918001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase EMB86, EMB1030, EMB263 0.9249743060854192 32 GSVIVT01035975001 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana PGR3 0.9241978528209387 33 GSVIVT01023693001 Protein TSS OS=Arabidopsis thaliana 0.922918529004886 34 GSVIVT01000051001 0.9224926840909303 47 GSVIVT01024261001 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGB, SIG2, SIGA, SIG1, RPOD1 0.9215470367976517 36 GSVIVT01000079001 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 695.3) 0.921526097227985 37 GSVIVT01001533001 0.9209997969556768 38 GSVIVT01011555001 Photosynthesis.calvin cycle.phosphoribulokinase PRK 0.9209685077102221 51 GSVIVT01038618001 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.920929820673364 40 GSVIVT01015471001 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana 0.9208007419828308 41 GSVIVT01035330001 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGC, SIG3 0.91958147689506 42 GSVIVT01033621001 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase GLU1, FD-GOGAT, GLS1, GLUS 0.9195029044557104 43 GSVIVT01003433001 Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional GTP cyclohydrolase II (RibA) and DHBP synthase (RibB) GCH, ATGCH, RFD1, ATRIBA1 0.9190991027146879 44 GSVIVT01020495001 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor FUG1 0.9187626669121299 45 GSVIVT01003980001 Pentatricopeptide repeat-containing protein At3g46610 OS=Arabidopsis thaliana 0.9184175091829437 46 GSVIVT01024637001 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.SLP phosphatase 0.917487785234894 47 GSVIVT01005201001 Probable 2-carboxy-D-arabinitol-1-phosphatase OS=Arabidopsis thaliana 0.9167677050351646 48 GSVIVT01038572001 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PPH1/TAP38 phosphatase TAP38, PPH1 0.9160714497253886 49 GSVIVT01029990001 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein PSB29, THF1 0.9158922191695303 50 GSVIVT01023695001 Protein TSS OS=Arabidopsis thaliana 0.9156739316628992 51 GSVIVT01020446001 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana 0.9149368043631314 52 GSVIVT01031251001 Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana LPA66 0.9148170105000425 53 GSVIVT01002784001 Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana SIP2, AtSIP2 0.9139099583955628 54 GSVIVT01017762001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.9132116050318367 97 GSVIVT01022434001 Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana AAE16 0.9122930701622299 56 GSVIVT01026405001 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.VDE violaxanthin de-epoxidase NPQ1, AVDE1 0.9122056099041053 84 GSVIVT01019065001 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1 0.9098759058262748 59 GSVIVT01034494001 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP1, Deg1 0.9090514620773119 60 GSVIVT01021388001 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase 0.9089791323380775 79 GSVIVT01035858001 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) APX6 0.9084620699124628 62 GSVIVT01019074001 Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase scpl20 0.9083396390875612 68 GSVIVT01018563001 Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica 0.9083350383070278 64 GSVIVT01012171001 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst ATFKBP13, FKBP13 0.9065432433372519 82 GSVIVT01026324001 0.9065032703117342 67 GSVIVT01006618001 Cytochrome P450 CYP72A219 OS=Panax ginseng CYP72A7 0.9046164996743057 68 GSVIVT01025541001 Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana 0.9039320575931329 69 GSVIVT01030117001 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 165.3) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.9028590403060973 75 GSVIVT01007638001 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor ATRAB8D, ATRABE1B, RABE1b 0.9025777017476813 72 GSVIVT01034037001 Photosynthesis.calvin cycle.fructose-1,6-bisphosphatase HCEF1 0.9015294815514437 75 GSVIVT01011966001 Cytoskeleton.cp-actin-dependent plastid movement.CHUP motility factor CHUP1 0.9010018172833428 76 GSVIVT01011946001 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP1) MAP1C, MAP1B 0.900940269334367 77 GSVIVT01022011001 0.9005077183118294 79 GSVIVT01028621001 0.899541282634331 81 GSVIVT01009624001 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO OEC33, PSBO-2, PSBO2 0.8981300346427432 83 GSVIVT01007976001 Photosynthesis.calvin cycle.phosphopentose epimerase RPE, EMB2728 0.8978670804830954 89 GSVIVT01008723001 High mobility group B protein 9 OS=Arabidopsis thaliana 0.8976487676861654 95 GSVIVT01029794001 Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa subsp. indica 0.8976279123692285 87 GSVIVT01027487001 Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana 0.8974378615054177 89 GSVIVT01019684001 CP5 0.8972199056181691 90 GSVIVT01035407001 Glycine dehydrogenase (decarboxylating), mitochondrial OS=Solanum tuberosum 0.8963359441839626 91 GSVIVT01034516001 Carbohydrate metabolism.gluconeogenesis.cytosolic fructose-1,6-bisphosphatase 0.8957774332882463 94 GSVIVT01024376001 0.8956970878391093 95 GSVIVT01022128001 Phytohormones.abscisic acid.synthesis.ABA1 zeaxanthin epoxidase ABA1, IBS3, ATABA1, ZEP, NPQ2, LOS6, ATZEP 0.8952414392008974 96 GSVIVT01024012001 Photosynthesis.photorespiration.hydroxypyruvate reductase HPR, ATHPR1 0.8949039795147824 100 GSVIVT01011952001 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN7 0.8947906435341565 98 GSVIVT01003859001 Photosynthesis.photorespiration.serine hydroxymethyltransferase STM, SHM1, SHMT1 0.8937030792626515 99