Sequence Description Alias PCC hrr GSVIVT01030649001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG2, ATXR3 0.9115716580946999 1 GSVIVT01010769001 DExH-box ATP-dependent RNA helicase DExH12 OS=Arabidopsis thaliana emb1507 0.8596998586786126 20 GSVIVT01033511001 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana SRCAP, PIE1, chr13 0.8421061681219386 61 GSVIVT01007885001 0.8381016735472617 40 GSVIVT01003914001 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component 0.8375713418018049 10 GSVIVT01031411001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8294789365046126 16 GSVIVT01026952001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor CHA2, CHR2, BRM, ATBRM 0.829251115579565 40 GSVIVT01019046001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component 0.8282508806072744 18 GSVIVT01011972001 Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear lamina.CRWN lamin-like protein LINC3 0.8257704894585393 14 GSVIVT01030107001 Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana 0.825247176966401 11 GSVIVT01014274001 DNA damage response.BRCA1–BARD1 DNA-damage response heterodimer.BRCA1|BARD1 component 0.82311802863308 12 GSVIVT01020162001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component EMB2016 0.8224380502895055 36 GSVIVT01000234001 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase PDR2, MIA 0.8219408364816799 24 GSVIVT01033231001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80 0.8219281760711299 74 GSVIVT01012049001 RNA biosynthesis.transcriptional activation.HUA2 transcription factor HUA2 0.821055426194164 16 GSVIVT01025586001 Lipid metabolism.glycerolipid synthesis.phosphatidic acid.phosphatidic acid phosphatase PAH1, ATPAH1 0.8209517306578289 17 GSVIVT01014219001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8209408549536694 33 GSVIVT01016344001 Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.8190436439122142 50 GSVIVT01020543001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2 0.8186397341601871 35 GSVIVT01035014001 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8170961339650232 47 GSVIVT01035878001 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.8170643582109657 26 GSVIVT01035288001 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase 0.815894647235699 23 GSVIVT01009365001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF4 component TAF4, TAF4B 0.8150712885755922 24 GSVIVT01011100001 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.8144372192457959 25 GSVIVT01007917001 0.813585164907049 54 GSVIVT01017770001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATALY3, ALY3 0.8135218472557111 62 GSVIVT01011020001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component SCC3, ATSCC3 0.8058988606371261 31 GSVIVT01010035001 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor ACCD 0.8049719761354914 83 GSVIVT01009834001 Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana LDL3 0.8047873584778107 38 GSVIVT01011388001 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM732 component 0.8015284753176886 49 GSVIVT01000922001 0.8006546323143471 44 GSVIVT01035731001 0.7999650959985871 63 GSVIVT01000835001 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component EMB2765 0.7973757061541097 91 GSVIVT01006448001 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.CPL1/2 phosphatase ATCPL1, CPL1, FRY2 0.7969532631973096 45 GSVIVT01019761001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.7967688205024629 81 GSVIVT01028685001 Chromatin modification-related protein EAF1 A OS=Arabidopsis thaliana 0.7965143792598584 76 GSVIVT01029442001 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor ATHPCAT2, HAC1, ATHAC1, PCAT2 0.7958849571183161 75 GSVIVT01012117001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor PKR1, CHR4 0.7946132412676891 48 GSVIVT01037231001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.7942856475423367 50 GSVIVT01035592001 EMB1611, MEE22 0.7936878836582192 51 GSVIVT01011619001 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2 0.7933836361390474 87 GSVIVT01016309001 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component 0.7918571229894469 54 GSVIVT01032137001 Protein OBERON 4 OS=Arabidopsis thaliana 0.7907322181359925 56 GSVIVT01017736001 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component PPI2, ATTOC159, TOC159, TOC160, TOC86 0.7905478078031829 57 GSVIVT01020936001 0.7904965566955103 58 GSVIVT01028706001 0.7893235504916231 59 GSVIVT01025725001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor TKI1 0.7890594575232217 60 GSVIVT01018331001 Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana CUM2, EIF4G 0.7842535736285755 63 GSVIVT01025385001 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase 0.7836195219051983 64 GSVIVT01016617001 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter PGP20 0.780862086145458 66 GSVIVT01013204001 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA 0.7800090801876413 73 GSVIVT01017767001 Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.betagamma regulatory subunit ATSNF4, SNF4 0.779804200301903 68 GSVIVT01037455001 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS3 0.7791291620146866 71 GSVIVT01026496001 Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana PI4KBETA1, PI-4KBETA1 0.7772367142794132 89 GSVIVT01005044001 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana TPR16 0.776912396673281 81 GSVIVT01008944001 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.776686038215473 84 GSVIVT01009936001 0.7765592884960084 74 GSVIVT01028137001 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana 0.7756587742396853 76 GSVIVT01009833001 Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana LDL3 0.7746977462543777 77 GSVIVT01036378001 0.7733706310561334 97 GSVIVT01027118001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component ATX4, SDG16 0.7733683265462225 79 GSVIVT01009040001 Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana ATMBD8, MBD8 0.772945105443328 80 GSVIVT01014783001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.VCS scaffold component VCS 0.7721186870208363 85 GSVIVT01023952001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein 0.7707786781632555 83 GSVIVT01005913001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component SUVH5, SGD9 0.7702105856131544 84 GSVIVT01012646001 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component PCFS4 0.7693809103492748 86 GSVIVT01035328001 0.7683511956811682 87 GSVIVT01025073001 0.7681789301904824 88 GSVIVT01020605001 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor 0.7677375327380045 90 GSVIVT01009206001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL2 0.76686763752654 96 GSVIVT01022139001 0.7653641808554645 94 GSVIVT01007806001 0.7651930744568051 98