Sequence Description Alias PCC hrr GSVIVT01033327001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 NRPA1 0.8717443318402999 14 GSVIVT01030051001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin 0.8664398404005749 21 GSVIVT01005813001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ELYS scaffold nucleoporin HOS1 0.846250241297146 22 GSVIVT01010035001 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor ACCD 0.8443613046208327 26 GSVIVT01034996001 FIP1[V]-like protein OS=Arabidopsis thaliana FIP1[V], ATFIP1[V], FIPS5, ATFIPS5 0.8429691314983345 10 GSVIVT01024104001 0.8419975129964588 34 GSVIVT01023393001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.ATRX chromatin remodeling factor CHR20, ATRX 0.8417536366180638 43 GSVIVT01022300001 RNA processing.RNA decay.exosome complex.associated co-factors.Dis3/RRP44 exoribonuclease EMB2763 0.840206217901331 13 GSVIVT01031411001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8384657425530707 12 GSVIVT01017770001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATALY3, ALY3 0.8354659890222529 24 GSVIVT01009302001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein ATPRP40A, PRP40A 0.8344352749476845 18 GSVIVT01036698001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin NUA, AtTPR 0.8342163574753599 62 GSVIVT01010209001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein ATPRP40C, PRP40C 0.8327924535543488 89 GSVIVT01019046001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component 0.8326117569112957 15 GSVIVT01010750001 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.831712908300351 17 GSVIVT01034015001 RNA processing.RNA 5-end cap adding.mRNA capping enzyme 0.8313317695252664 27 GSVIVT01017686001 0.8258602540024054 64 GSVIVT01016771001 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component 0.8239561916869571 19 GSVIVT01016980001 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.transfer phase.MMS19 component 0.8236505219910066 39 GSVIVT01019359001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) BTAF1, RGD3, CHA16, ATBTAF1, CHR16 0.8216200704228124 72 GSVIVT01031410001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5 chromatin remodeling factor RAD5 0.8200147629727365 99 GSVIVT01033430001 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.RRP5 assembly factor 0.8199930395431528 34 GSVIVT01001079001 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class I ARF-GAP protein VAN3, SFC, AGD3 0.8186367773392643 94 GSVIVT01000253001 Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.HDC1/Rxt3 associated component 0.8173227657417352 60 GSVIVT01010632001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase VALRS, TWN2 0.8132407057600018 64 GSVIVT01017791001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Iswi chromatin remodeling factor CHR17 0.8110819570252011 30 GSVIVT01005044001 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana TPR16 0.8107026783040767 31 GSVIVT01019950001 emb1579 0.8102489680323551 51 GSVIVT01020281001 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst CYP59, ATCYP59 0.8095223067478308 34 GSVIVT01030782001 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).DNA repair protein (RAD4) RAD4, ATRAD4 0.8083297166358303 35 GSVIVT01036288001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.8055014654536881 37 GSVIVT01035591001 EMB1611, MEE22 0.8050397764351476 44 GSVIVT01038625001 0.8043265639096767 99 GSVIVT01017369001 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS8 0.8043240824945823 40 GSVIVT01013627001 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8035939969804957 70 GSVIVT01016344001 Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.8032436915651213 82 GSVIVT01036918001 Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana 0.803095932184769 44 GSVIVT01018223001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase RDO4, HUB1 0.8015400087205548 61 GSVIVT01009684001 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN4 component FUS8, EMB134, CSN4, COP8, COP14, ATS4, FUS4 0.8005937217085257 48 GSVIVT01016590001 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP1 component ABO1, ELO2 0.798851530099728 88 GSVIVT01036518001 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) 0.7986118778905393 51 GSVIVT01034052001 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst DEI1, PAS1 0.7983910121018991 74 GSVIVT01000245001 Chromatin organisation.DNA methylation.non-canonical RNA-directed DNA methylation.SGS3 stabilization factor ATSGS3, SGS3 0.7959626777158246 53 GSVIVT01035813001 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.7956346421330625 54 GSVIVT01008886001 0.7955219027269511 55 GSVIVT01020844001 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS16/VCL1 component VCL1, EMB258, MAN 0.7953685183574654 61 GSVIVT01001899001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease ATUBP5, UBP5, PDE323 0.7948597133104269 75 GSVIVT01023587001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor 0.7936931828195984 59 GSVIVT01026496001 Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana PI4KBETA1, PI-4KBETA1 0.7930227204032501 61 GSVIVT01019386001 RNA biosynthesis.transcriptional activation.ARID transcription factor 0.7923987798390933 65 GSVIVT01010343001 Cell division control protein 48 homolog C OS=Arabidopsis thaliana emb1354, CDC48C 0.792310933190561 67 GSVIVT01003416001 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase 0.7918583675302094 78 GSVIVT01012038001 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.7916599804510489 69 GSVIVT01014233001 Transcription factor GTE4 OS=Arabidopsis thaliana GTE4 0.7896771377879048 72 GSVIVT01010735001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase 0.7889647401300224 73 GSVIVT01034169001 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) PRT6 0.7887787689103511 77 GSVIVT01016742001 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO3/XPOT export karyopherin PSD 0.7871908474089515 77 GSVIVT01035963001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol V catalytic subunits.subunit 2 DRD2, NRPE2, NRPD2A, NRPD2, DMS2 0.7861009948922334 78 GSVIVT01025503001 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-II glucosidase II complex.subunit beta PSL4 0.7846695105789393 82 GSVIVT01014441001 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component ATMRE11, MRE11 0.7834059751867669 84 GSVIVT01012163001 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.7810284790095992 87 GSVIVT01010869001 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana CRR22 0.7804070895227806 90 GSVIVT01035592001 EMB1611, MEE22 0.7797541111703656 92 GSVIVT01037455001 RNA biosynthesis.transcriptional activation.FAR1 transcription factor FRS3 0.7787229165345209 99