Sequence Description Alias PCC hrr GSVIVT01016204001 Protein RNA-directed DNA methylation 3 OS=Arabidopsis thaliana 0.8914020493219682 4 GSVIVT01008258001 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.CASP-type golgin CASP, AtCASP 0.8681347707972293 2 GSVIVT01013491001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol V catalytic subunits.subunit 1 DRD3, ATNRPD1B, NRPD1B, NRPE1, DMS5 0.8639183972501515 55 GSVIVT01037513001 Protein modification.phosphorylation.TSL/TOUSLED kinase TSL 0.86204287166181 9 GSVIVT01008114001 Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana 0.8611949822806141 24 GSVIVT01028743001 0.8572214299381414 6 GSVIVT01031842001 0.8570540154938617 7 GSVIVT01033181001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component TTN7, SMC3 0.8558046891640126 41 GSVIVT01024809001 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component 0.8556607841928928 26 GSVIVT01028411001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component SDG18, SUVR2 0.854938888710213 19 GSVIVT01036136001 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component 0.8524129944664653 83 GSVIVT01012107001 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.852215048818775 40 GSVIVT01015096001 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP6/CTR9 component ELF8, VIP6 0.8517648439972061 14 GSVIVT01007736001 Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.8489723618525541 24 GSVIVT01022379001 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP6 component 0.8488219213742714 88 GSVIVT01020844001 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS16/VCL1 component VCL1, EMB258, MAN 0.8486429368940216 16 GSVIVT01032418001 Protein RST1 OS=Arabidopsis thaliana RST1 0.8486321007572261 17 GSVIVT01014219001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.84746094422877 18 GSVIVT01017346001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14 0.847405286632055 93 GSVIVT01035901001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3 0.8468306623465585 87 GSVIVT01036698001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin NUA, AtTPR 0.8464981855702074 51 GSVIVT01005970001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B3 component 0.8461560782746727 39 GSVIVT01020232001 Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana ATMBD9, MBD9 0.8438505324269404 28 GSVIVT01038553001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.8425131240457048 24 GSVIVT01022440001 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.8409771215342884 92 GSVIVT01031306001 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16 0.8397968350917169 28 GSVIVT01025370001 Cell wall.callose.callose synthase ATGSL10, gsl10, CALS9 0.8365837935528839 88 GSVIVT01019869001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol IV catalytic subunits.subunit 1 NRPD1A, POL IVA, NRPD1, SMD2, SDE4 0.8357427662876113 38 GSVIVT01016897001 Solute transport.channels.Ca-ClC-type calcium-dependent anion channel 0.834474857860602 35 GSVIVT01026206001 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component 0.8342331637250455 51 GSVIVT01010209001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein ATPRP40C, PRP40C 0.8340112724980274 87 GSVIVT01027630001 0.8336459348492932 59 GSVIVT01016203001 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.KTF1/SPT5L auxilary silencing factor SPT5L, KTF1 0.8319865158433383 39 GSVIVT01035326001 0.8317335111703325 40 GSVIVT01000696001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP15 0.8314109819413587 84 GSVIVT01010889001 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.IDN/IDP regulatory protein 0.8313567770938911 46 GSVIVT01038625001 0.8305739422275952 44 GSVIVT01010035001 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor ACCD 0.8287510119115407 46 GSVIVT01016771001 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component 0.8281179543858915 47 GSVIVT01015463001 0.8232112474100803 52 GSVIVT01023393001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.ATRX chromatin remodeling factor CHR20, ATRX 0.8223398287837062 93 GSVIVT01010750001 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.8222506784366109 54 GSVIVT01019165001 PKR1, CHR4 0.8216478074616874 99 GSVIVT01034328001 Transcription factor GTE1 OS=Arabidopsis thaliana GTE1, GTE01, IMB1 0.8216192095928895 56 GSVIVT01019950001 emb1579 0.8203103803767385 57 GSVIVT01028893001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTB component EMB1691 0.8199405428688968 72 GSVIVT01012004001 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase TADA, ATTADA 0.8173227657417352 60 GSVIVT01024512001 Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana DMS1, DRD1, CHR35 0.8162781255243281 63 GSVIVT01035736001 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.Hsp110 protein 0.8157724439016555 65 GSVIVT01017686001 0.8123458473188093 98 GSVIVT01035415001 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.810793567813395 72 GSVIVT01017738001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component AXR6, ATCUL1, CUL1 0.8104987049496075 73 GSVIVT01033777001 DNA damage response.DNA repair mechanisms.base excision repair (BER).bifunctional DNA glycosylase/lyase (ROS1) DML1, ROS1 0.809686691896995 75 GSVIVT01028296001 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) ATPARP2, PARP2 0.8082812957810187 77 GSVIVT01016344001 Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.8081186076588736 78 GSVIVT01031636001 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.type-1A topoisomerase TOP3b 0.8073599414610856 79 GSVIVT01035014001 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8064071410074232 82 GSVIVT01015040001 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia UBP1B 0.8059301736580375 93 GSVIVT01017791001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Iswi chromatin remodeling factor CHR17 0.8052466124542039 87 GSVIVT01036544001 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).Augmin gamma-TuRC recruiting complex.AUG5 component 0.8042066208924382 92 GSVIVT01024418001 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin XPO1A, HIT2, ATCRM1, XPO1, ATXPO1 0.8037648550040344 94 GSVIVT01017770001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATALY3, ALY3 0.8033547710825013 95 GSVIVT01007280001 Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana 0.8032953375483205 96 GSVIVT01023955001 RNA biosynthesis.transcriptional activation.FAR1 transcription factor 0.8027396119868592 97 GSVIVT01031114001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.8020755461713772 98 GSVIVT01025062001 Solute transport.primary active transport.P-type ATPase superfamily.P2 family.ECA P2A-type calcium cation-transporting ATPase ECA4, ATECA4 0.800099547347756 100