Sequence Description Alias PCC hrr Smo413766 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.9167852691035694 6 Smo165828 RPH1 0.9106936940961315 3 Smo412627 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB5/NDH18 component NDH18 0.901829523466866 4 Smo64169 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component 0.880350523023251 33 Smo437956 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB2 component CCB2, HCF208 0.8793534930719871 5 Smo74261 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum PDS3, PDS, PDE226 0.8773376686030887 68 Smo438672 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2 0.8769513021885776 13 Smo177176 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.8766199864425842 30 Smo405914 0.873416401442014 9 Smo230291 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL24 component 0.8725561669003833 10 Smo438154 0.8718776828143612 11 Smo139888 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PPL1 protein PPL1 0.869143603939314 12 Smo164192 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PPL1 protein PPL1 0.869143603939314 13 Smo126894 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) 0.8680189592494519 19 Smo233833 0.8643080063688665 15 Smo117255 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana 0.8584358414075549 21 Smo85565 0.8548921108781058 44 Smo117112 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor APE1 0.8547400866842442 91 Smo73752 0.8543025414446027 19 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8525425534648444 92 Smo444102 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component 0.8522760449515413 21 Smo148450 Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana 0.8508613936359324 22 Smo437910 0.8496374177457607 23 Smo447828 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.8492804136159291 78 Smo439533 0.8491948152817379 55 Smo55147 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 0.8485582317012975 81 Smo417198 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase PGLP1, ATPGLP1 0.8469218301875487 69 Smo75269 Uncharacterized protein At1g26090, chloroplastic OS=Arabidopsis thaliana 0.8468415800355586 29 Smo134640 0.8446404779330238 29 Smo443338 0.8446136707314326 30 Smo121553 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.VDE violaxanthin de-epoxidase 0.8402090504891727 31 Smo81106 0.8390827322288046 32 Smo447003 Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum 0.8360914819104773 44 Smo412250 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor 0.8353272337669152 34 Smo130316 Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana TIC55-IV, ACD1-LIKE, PTC52 0.8328721604040712 89 Smo417702 0.8327373329899531 37 Smo97903 Photosynthesis.photorespiration.glycerate kinase 0.827518438419046 99 Smo418548 Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 OS=Arabidopsis thaliana 0.8256103513668461 77 Smo442467 0.8241771716695819 40 Smo233392 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PPH1/TAP38 phosphatase TAP38, PPH1 0.8231144277032565 53 Smo77470 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component FRD4, CPFTSY 0.8225084747908152 43 Smo67570 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL4 component 0.8224355158237282 44 Smo407438 Protein GAMETE EXPRESSED 2 OS=Arabidopsis thaliana ATGEX2, GEX2 0.8213503359522182 72 Smo437924 Probable indole-3-acetic acid-amido synthetase GH3.12 OS=Oryza sativa subsp. japonica DFL2, GH3-10 0.8199498389586749 83 Smo185868 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CSP41A 0.8167819812237068 78 Smo165641 Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana 0.8166878359862748 70 Smo63596 Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana 0.8165424986147419 95 Smo446035 0.8161327126839131 84 Smo106498 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein LIL3:1 0.8150990461964053 53 Smo235851 0.8131459284372528 55 Smo134339 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.Viridiplantae-specific components.OEC23 component PsbP OE23, OEE2, PSBP-1, PSII-P 0.8094549080704607 59 Smo89647 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.IBA57 component 0.8087078770528935 60 Smo177574 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL15 component RPL15 0.8054281989746359 72 Smo270723 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component CPSRP43, CAO 0.8050254999993703 97 Smo100929 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP2 0.8043156513073256 65 Smo76801 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana 0.8035200225841779 68 Smo104800 RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase 0.8009902445463657 72 Smo170713 0.8003555327819193 75 Smo411048 0.7996200034211578 76 Smo429736 0.7983625886458577 78 Smo133157 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CSP41A 0.7970004128210323 81 Smo71144 RNA processing.organelle machineries.ribonuclease activities.ERIL exoribonuclease 0.790555087900334 88 Smo98540 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 0.7903866597860849 89 Smo448611 Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana 0.7881938189445733 91 Smo437938 Protein SINE1 OS=Arabidopsis thaliana 0.7873336489907449 92 Smo166736 0.787087285090916 93 Smo109100 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 0.7864941784688124 95 Smo449074 Serotonin N-acetyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica 0.7850029619563191 98 Smo103058 0.7845525971719901 99 Smo448880 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.NdhU component 0.7844528805360903 100