Sequence Description Alias PCC hrr Smo85565 0.9443264158549737 1 Smo183248 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase GSA2 0.9257061042125566 2 Smo164683 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase HEMC 0.9236556890887588 3 Smo64169 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component 0.9130866619527025 10 Smo64073 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component 0.9079113951347019 5 Smo165641 Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana 0.9002658801386514 6 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CRB, HIP1.3, CSP41B 0.899834205571835 16 Smo85661 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PBCP phosphatase 0.8992396156567746 10 Smo417198 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase PGLP1, ATPGLP1 0.8989080660696314 14 Smo143134 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.8977110193377695 32 Smo92083 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.8884656997147488 31 Smo174616 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V 0.8805018452995103 51 Smo233392 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PPH1/TAP38 phosphatase TAP38, PPH1 0.8777059803632838 13 Smo428653 Redox homeostasis.chloroplast redox homeostasis.NADPH-dependent thioredoxin reductase NTRC 0.8747503661009943 14 Smo417702 0.8734356950268707 15 Smo117255 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana 0.8724063578270858 16 Smo74261 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum PDS3, PDS, PDE226 0.8722424755059205 79 Smo126894 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) 0.871760099562602 18 Smo185868 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CSP41A 0.8702115596870471 31 Smo166751 0.8686644734078837 20 Smo439600 ABC transporter F family member 5 OS=Arabidopsis thaliana ATGCN5, GCN5 0.8670165320401891 66 Smo93357 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter 0.8648635604776699 22 Smo110629 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.HST homogentisate solanesyltransferase HST, ATHST, PDS2 0.8648183749019472 23 Smo101399 ACT domain-containing protein ACR12 OS=Arabidopsis thaliana 0.8634924430302211 24 Smo409724 0.8613292686108167 25 Smo100929 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP2 0.8608535416278632 26 Smo134250 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein LPA1 0.8607116291321308 27 Smo47339 Protein modification.peptide maturation.plastid.PLSP/TPP plastidic signal peptidase PLSP1 0.8603801113387828 28 Smo97903 Photosynthesis.photorespiration.glycerate kinase 0.859978613247135 50 Smo99197 D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana GEK1 0.8560150118108445 31 Smo25109 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 0.853866185976276 62 Smo81106 0.8534065938835823 33 Smo440512 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component 0.8529709704773094 74 Smo82847 Nutrient uptake.iron uptake.iron storage.non-haem ferritin ATFER3, FER3 0.8528619818447665 35 Smo447828 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.8520567583050317 73 Smo145591 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RNC1 ribonuclease 0.8518012672876206 37 Smo142751 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica 0.851574173170207 38 Smo437487 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 0.851386197032422 44 Smo77263 Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana 0.8512887128573293 40 Smo404832 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component PTAC5 0.8505124931815088 73 Smo437910 0.8498049706341132 42 Smo402255 Protein Iojap, chloroplastic OS=Arabidopsis thaliana 0.848849974508814 43 Smo447003 Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum 0.8452327010175413 44 Smo438881 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana 0.8434219045216781 53 Smo271184 0.8408815271065541 46 Smo437618 0.8389810511103133 48 Smo90520 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.8363918730770544 88 Smo413295 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana 0.8349864526521078 60 Smo270406 Nucleotide metabolism.purines.phosphotransfers.adenylate kinase 0.8340899350545018 60 Smo228435 Photosynthesis.calvin cycle.phosphopentose epimerase RPE, EMB2728 0.8317047938643707 60 Smo110000 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8303944075291387 83 Smo57444 Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana 0.8279430431983212 56 Smo66389 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component PGR5-LIKE A 0.8276986304245548 57 Smo415087 0.8270658156723054 58 Smo98540 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 0.8257678613326689 60 Smo65804 Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.8241096559651284 61 Smo174737 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 0.8230837847976668 82 Smo106498 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein LIL3:1 0.8219759225192043 64 Smo81134 0.8211147312103613 83 Smo104804 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCq component 0.8210068630516206 66 Smo419135 0.8202847615702145 67 Smo270181 0.819091575632086 75 Smo73752 0.8182626673875661 69 Smo126991 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP7/TAC14 component PTAC14 0.8156796950097074 74 Smo440437 Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).gamma-hydroxybutyrate formation.bifunctional gamma-hydroxybutyrate dehydrogenase and glyoxylate reductase GR2, GLYR2 0.8152278362745895 75 Smo96268 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.8133513966129216 76 Smo75120 Protein root UVB sensitive 5 OS=Arabidopsis thaliana RUS5 0.8123142513732369 99 Smo269565 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.red chlorophyll catabolite reductase (RCCR) ATRCCR, ACD2 0.8116838544201131 80 Smo170011 0.8071158157687119 85 Smo113331 Photosynthesis.photorespiration.glycine cleavage system.H-protein lipoamide-containing component 0.8067441478116258 85 Smo75290 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 0.8066360709621426 86 Smo441909 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase HEMB1 0.8057987894430493 90 Smo75581 Phytohormones.auxin.synthesis.indole-3-pyruvic acid (IPyA) pathway.tryptophan aminotransferase 0.8031549995685981 92 Smo230291 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL24 component 0.8028275643346845 94 Smo103058 0.7994244493462195 97 Smo180340 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone AKR2B 0.7986214303152447 98 Smo412307 0.79764408389595 99