Sequence Description Alias PCC hrr Smo160385 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit 0.9386679955676585 6 Smo182327 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component 0.9373784521653142 13 Smo413471 0.9365868198295878 3 Smo90823 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component ATMED14, MED14, SWP 0.9338258997216509 29 Smo438209 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) PRT6 0.92902924797687 11 Smo110655 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana EMB976 0.927542944749419 6 Smo100054 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase 0.9248422729093722 7 Smo419083 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UPT6 assembly factor 0.9232661245708564 8 Smo404798 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase BGAL8 0.922772701140587 9 Smo127003 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) KEA1, ATKEA1 0.9225084040894044 10 Smo270356 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.tRNA adenine-N6-methyltransferase 0.9199355678286197 11 Smo443671 Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana 0.9194511319938337 23 Smo443962 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL6 0.9189532395283702 46 Smo79007 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.9177279608336607 14 Smo85532 0.9168295724071207 19 Smo173767 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.9163717385605986 50 Smo167789 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH7/9 component ftsh9 0.9158154905443552 22 Smo420183 RNA biosynthesis.transcriptional activation.Trihelix transcription factor 0.9148460048817126 18 Smo70578 0.9139527512762358 57 Smo413898 0.912718706154712 20 Smo235391 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.9126728879128173 21 Smo145521 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component DDB1A 0.9125762972772248 22 Smo171199 Multi-process regulation.TOR signalling pathway.TORC complex.RAPTOR regulatory component RAPTOR1, ATRAPTOR1B, RAPTOR1B 0.9119674164491599 24 Smo236021 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.9118274320991082 24 Smo118822 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein SCD1 0.9095304798581894 25 Smo441953 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP 0.9087427728134451 49 Smo139482 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase 0.9086491025954371 37 Smo165973 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana GRV2, KAM2 0.9085526370295297 28 Smo413864 0.9082323456530329 30 Smo444681 0.9076102124621175 30 Smo111871 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.Pex6 component PEX6 0.9073080190926733 31 Smo175932 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PPKL phosphatase BSL3 0.9062215229296411 47 Smo440912 0.9056850871810307 33 Smo164675 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone GTB1 0.9053818370921588 69 Smo266713 Solute transport.channels.MIP family.tonoplast intrinsic protein (TIP-type) ATTIP2;1, TIP2;1, DELTA-TIP, DELTA-TIP1, AQP1 0.9048720162211287 35 Smo438275 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.9036856031718835 45 Smo406538 Transportin MOS14 OS=Arabidopsis thaliana 0.9025661748158696 37 Smo177195 RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor TIFY2B, ZML1, GATA24 0.9017972349179559 38 Smo79650 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase HEN2 0.901624899910922 39 Smo439144 0.9001409955522139 40 Smo406046 0.8993855821499661 97 Smo109501 Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana AAE17 0.8988048373491534 42 Smo443682 Uncharacterized protein At4g19900 OS=Arabidopsis thaliana 0.8985730812837699 43 Smo101367 0.8979087034200276 49 Smo177376 Short integuments 2, mitochondrial OS=Arabidopsis thaliana 0.8972343820558771 45 Smo90432 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8968777802756124 46 Smo438708 Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana CID7 0.8968550481633466 49 Smo144158 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase emb1507 0.8963600668985579 48 Smo161477 Transcriptional repressor ILP1 OS=Arabidopsis thaliana ILP1 0.8951383542481011 49 Smo441325 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ZC11A component 0.894715307439162 50 Smo411667 0.893234723286113 51 Smo122175 Solute transport.primary active transport.P-type ATPase superfamily.P2 family.ECA P2A-type calcium cation-transporting ATPase ECA3, ATECA3 0.892156012512063 52 Smo115934 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI3 component 0.8920147459291498 57 Smo129262 Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.DHR2-type exchange factor 0.8916899481985316 55 Smo61158 0.8910324959130668 56 Smo438861 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component 0.8904175696715412 91 Smo406265 0.8901639665058217 58 Smo407186 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.8899265666969293 59 Smo447098 Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter ATEIN2, PIR2, EIN2, ERA3, ORE3, CKR1, ORE2 0.889490837758462 60 Smo438348 Protein MEI2-like 5 OS=Arabidopsis thaliana AML5, ML5 0.8893986742726215 61 Smo164122 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component ALA3 0.8893569242820607 88 Smo168663 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED5/MED24/MED33 component MED33A, RFR1 0.8879923933150083 63 Smo439080 0.8878813246524182 64 Smo150233 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase ETFQO 0.8876183087821453 99 Smo149035 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase CSB3, CLB4, GCPE, HDS, ISPG 0.8869848868626775 66 Smo169728 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase PAPS1 0.8866733468081567 67 Smo154179 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL2 0.8864492417484814 71 Smo447924 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component GCT 0.886115809910979 69 Smo156885 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) KEG 0.8859429541859072 70 Smo424372 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.8857726740542645 72 Smo93800 Protein modification.peptide maturation.endomembrane system.gamma secretase complex.NCT component 0.8855643800549847 72 Smo88152 Nucleotide metabolism.purines.salvage pathway.AMP deaminase activities.membrane-associated AMP deaminase FAC1, ATAMPD 0.8855020861407332 73 Smo99756 Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana 0.8851495353772938 81 Smo404055 RNA biosynthesis.transcriptional activation.HUA2 transcription factor HUA2 0.8848754308249578 77 Smo101488 Protein ARABIDILLO 1 OS=Arabidopsis thaliana ARABIDILLO-1, ARABIDILLO1 0.8848277574104159 77 Smo90560 DNA damage response.DNA repair polymerase activities.DNA polymerase eta (POLH) POLH 0.8848124206116372 78 Smo139717 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP98 nucleoporin NUP96, PRE, SAR3, MOS3 0.88449429604778 79 Smo81471 Protein degradation.peptidase families.metallopeptidase activities.carboxypeptidase activities.M28 carboxypeptidase 0.8841897536761936 80 Smo438142 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.glutathione reductase (GR) GR, EMB2360, ATGR2 0.883832874567719 81 Smo143427 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.8835212083804996 82 Smo407447 Nutrient uptake.copper uptake.reduction-based uptake.COPT Cu(+) transporter COPT5 0.8831378304555916 86 Smo114130 DExH-box ATP-dependent RNA helicase DExH16, mitochondrial OS=Arabidopsis thaliana ATSUV3, EDA15 0.8829352435263287 84 Smo50691 Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana 0.8824350912936912 85 Smo270796 Fatty acid amide hydrolase OS=Arabidopsis thaliana FAAH, AtFAAH 0.882197615606814 86 Smo417287 0.8821103439462559 87 Smo234671 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF73/Ysh1 component CPSF73-I 0.8815956880004268 88 Smo440463 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.8815287949535124 89 Smo99936 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.fungal elicitor response.PBL27/RLCK185 kinase 0.881354999529634 90 Smo40493 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase 0.8812946175297789 91 Smo50132 DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana HVT1, ATVT-1 0.8804674850893138 93 Smo423964 BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana 0.8800938548222074 94 Smo76555 F-box protein At4g00755 OS=Arabidopsis thaliana 0.8797568971081385 96 Smo88186 0.8794287780713547 97 Smo98757 Cell cycle.interphase.DNA replication.preinitiation.origin recognition complex.ORC2 component ORC2, ATORC2 0.878725331681111 99 Smo168492 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.type-1A topoisomerase TOP3b 0.8783195289165688 100