Sequence Description Alias PCC hrr Smo440740 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase 0.952972363343457 1 Smo80721 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.9181651633086267 7 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter ATATM1, ATM1 0.9157802979112272 3 Smo91298 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase 0.9143958145517707 4 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.9116067951386114 8 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.9108108717502077 19 Smo128521 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.CGL160 factor 0.9102679596396536 12 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.908410937473868 12 Smo141299 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.9069057985222659 9 Smo177598 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS) 0.9043214309824413 10 Smo146755 0.9032222275760315 12 Smo271998 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.9028691612161414 12 Smo444048 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2 OS=Arabidopsis thaliana 0.9027675485188599 13 Smo164227 Putative nitric oxide synthase OS=Oryza sativa subsp. japonica ATNOA1, ATNOS1, RIF1, NOS1, NOA1 0.9006330914825937 14 Smo413123 RAP domain-containing protein, chloroplastic OS=Oryza sativa subsp. japonica ATRAP, RAP 0.8980239588201738 15 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1 0.897419546516588 23 Smo135281 Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana 0.8947353017163123 17 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8939442699810805 18 Smo416844 0.8926184267462494 22 Smo418519 0.8918632041044089 20 Smo429547 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Ris1 chromatin remodeling factor 0.8918551545784505 28 Smo79954 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).SOQ1 negative NPQ-regulator protein 0.8910342206347829 22 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8905242985340168 23 Smo76814 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic56 component 0.8904493853980397 46 Smo116848 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.8893027329967443 25 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083 0.8886267230884213 26 Smo448320 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.8870984590843806 54 Smo58058 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana 0.8869046033242142 28 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.8865031709176717 58 Smo78872 Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase 0.8829531139264053 30 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8825686938497032 34 Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.882141739890059 49 Smo31929 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana 0.8820937300116981 63 Smo439163 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1 0.8810735563093594 35 Smo66389 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component PGR5-LIKE A 0.8789476833778266 35 Smo152929 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH8 0.8770423881053243 60 Smo74924 0.8726554561455575 40 Smo413295 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana 0.8719305860640268 38 Smo163827 Beta-glucosidase 25 OS=Oryza sativa subsp. japonica BGLU40 0.8708825035351379 39 Smo442872 0.8701210679567399 47 Smo118724 0.8690411197072041 71 Smo12954 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.8682380423579337 42 Smo77276 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana 0.8661150081299206 62 Smo109632 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.ndhA-specific mRNA splicing factor 0.8655052335348438 46 Smo410333 0.8634621362383713 92 Smo107842 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica CPSAR1, EMB269, ATOBGC 0.8629296279000096 47 Smo173467 Phytohormones.strigolactone.synthesis.DWARF27 biosynthesis protein 0.8622621074236899 48 Smo80394 0.8609711493561761 49 Smo447828 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.8609138204128248 60 Smo88014 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.8594023444555923 51 Smo106218 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme 0.8587171982582162 93 Smo148310 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component CLP2, CLPR2, NCLPP2 0.8581751649604392 55 Smo156007 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1 0.8565930673191251 57 Smo153292 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.8563166928768979 57 Smo103638 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana 0.8551603679489514 59 Smo146971 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase PDE181, ZDS, SPC1 0.8549638610128363 60 Smo409004 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.8542814715184212 90 Smo20205 Carbohydrate metabolism.sucrose metabolism.synthesis.sucrose-phosphate synthase SPS3F, ATSPS3F 0.8536018381090005 62 Smo130412 OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana 0.8529695937090955 63 Smo439600 ABC transporter F family member 5 OS=Arabidopsis thaliana ATGCN5, GCN5 0.8519830526682766 86 Smo99919 0.8517732026804052 65 Smo421525 Peroxidase 4 OS=Vitis vinifera PA2, ATPA2 0.8495677705274589 68 Smo444790 0.8468104642497195 69 Smo71323 Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana 0.8467718538798876 70 Smo174109 ATPase ARSA1 OS=Chlamydomonas reinhardtii 0.8467276708017766 71 Smo52692 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana 0.8466251832576259 72 Smo412574 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana ATRAP, RAP 0.845588434836566 80 Smo270181 0.8447388916147041 75 Smo440762 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor ELF6 0.844736328415864 76 Smo148692 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor FUG1 0.8446513076138995 80 Smo110000 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8442443048377971 78 Smo438910 0.8431163055252489 79 Smo405767 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana FTSH12, EMB36, EMB156, EMB1047 0.8429820349817462 94 Smo438647 Multi-process regulation.circadian clock.TOC1 evening oscillator component APRR1, AtTOC1, TOC1, PRR1 0.8420508081785141 82 Smo61778 0.8416883884626642 83 Smo95815 Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana 0.8411255346586975 85 Smo75120 Protein root UVB sensitive 5 OS=Arabidopsis thaliana RUS5 0.8382537271575347 86 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2 0.838114283825383 87 Smo84550 SH2 domain-containing protein A OS=Arabidopsis thaliana STATLA, ATSHA, SHA 0.8336094049307631 92 Smo73844 0.8333592366890247 93 Smo411217 Protein modification.acetylation.sirtuin-type lysine deacetylase SRT2, AtSRT2 0.8315818610215662 94 Smo89324 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type) ATCNGC20, CNGC20, CNBT1 0.8306138026771057 98 Smo164869 Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase(50.2.3 : 1036.2) & Phospholipid:diacylglycerol acyltransferase 1 OS=Arabidopsis thaliana PDAT1, PDAT, ATPDAT 0.8304327679982919 99 Smo117159 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1 0.8304188877833615 100