Sequence Description Alias PCC hrr Smo272095 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component 0.9669005401588587 1 Smo448162 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana 0.9497649757143197 3 Smo166088 Photosynthesis.photophosphorylation.cytochrome b6/f complex.Rieske iron-sulfur component PetC PGR1, PETC 0.9434376822660514 3 Smo403333 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana LHCA5 0.9273935688556866 4 Smo270825 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPA-2 0.9241789166638187 9 Smo271457 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB 0.9168930201547157 14 Smo233481 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor ATRAB8D, ATRABE1B, RABE1b 0.9130316822299472 11 Smo182694 Photosynthesis.calvin cycle.phosphoribulokinase PRK 0.9104991204963157 19 Smo103361 0.9103981002367457 13 Smo160384 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.9096368048868596 22 Smo31438 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.906314133640057 11 Smo85667 Solute transport.carrier-mediated transport.PLGG1 glycerate:glycolate transporter 0.9029809542694294 12 Smo235693 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.9017754484308582 32 Smo117112 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor APE1 0.9013851711858122 20 Smo227615 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136 0.9001669315608489 27 Smo93150 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN8 0.8987995460514446 16 Smo423707 0.8972407399150721 47 Smo177791 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase SPS1 0.8972317767948722 18 Smo126152 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana 0.8972108238340039 19 Smo131328 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1 0.894401253685976 20 Smo431963 0.8931563058786586 21 Smo449377 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO OEC33, PSBO-2, PSBO2 0.8878784193271061 22 Smo10032 Protein TSS OS=Arabidopsis thaliana 0.8873918046256529 23 Smo145704 0.8873600109046493 31 Smo145611 Photosynthesis.photorespiration.aminotransferases.glutamate-glyoxylate transaminase GGT2, AOAT2 0.8864538754305736 45 Smo266585 Photosynthesis.photorespiration.glycolate oxidase 0.8860048515752944 26 Smo229587 Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar 0.8853753384565041 27 Smo147927 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo dimer.small subunit 0.8846778372534108 28 Smo109271 Phytohormones.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE family.CLE precursor protein 0.8845149978631937 29 Smo107618 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CRB, HIP1.3, CSP41B 0.8842716249874861 30 Smo75562 0.8840079646382827 31 Smo98780 Monooxygenase 2 OS=Arabidopsis thaliana CTF2A 0.883997584139573 32 Smo79425 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase 0.8830563571482904 49 Smo448328 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 0.8813329649946257 53 Smo97883 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A1 activities.PC-PLA1-type phospholipase A1 0.8811529185642856 35 Smo420519 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.typical 2-Cys peroxiredoxin (2-CysPrx) 2CPB, 2-Cys Prx B 0.8810725455769657 36 Smo165329 UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana AtUGT85A7, UGT85A7 0.8792521835002397 37 Smo404832 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component PTAC5 0.8789261223385649 38 Smo272235 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO OEC33, PSBO-2, PSBO2 0.8788695609000582 39 Smo64109 0.8781929643220272 40 Smo173339 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein ATSULA, GC1, SULA 0.8780287867363329 56 Smo78847 UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana AtUGT85A7, UGT85A7 0.8780131863279542 42 Smo228435 Photosynthesis.calvin cycle.phosphopentose epimerase RPE, EMB2728 0.8776610851758219 43 Smo267533 Cellular respiration.glycolysis.plastidial glycolysis.phosphoglycerate kinase 0.8766781473914342 44 Smo82002 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF152 transcript stability factor CRM3, HCF152 0.8756380600155618 45 Smo93539 Solute transport.carrier-mediated transport.APC superfamily.NCS-1 family.nucleobase cation transporter (PLUTO-type) 0.8756087119137753 46 Smo170624 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component ATTOC132, TOC132 0.874468936439535 47 Smo270155 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.TPT phosphometabolite transporter GPT1, ATGPT1 0.8742934052433703 48 Smo102513 Carbonic anhydrase OS=Flaveria bidentis BCA4, CA4, ATBCA4 0.874202715859343 49 Smo271018 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component RPS1, ARRPS1 0.8739524160123668 50 Smo441569 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR membrane-tethering.TROL protein TROL 0.872892299464954 51 Smo25109 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 0.872555221066196 52 Smo55147 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 0.8718592426801248 53 Smo90782 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana 0.8716220996066563 54 Smo82221 Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana 0.8699947404749396 55 Smo90536 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class lambda 0.8688022305625257 79 Smo68704 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhN component 0.8684524940239159 57 Smo426174 0.8674949271383764 58 Smo429956 0.8671805545038516 59 Smo437924 Probable indole-3-acetic acid-amido synthetase GH3.12 OS=Oryza sativa subsp. japonica DFL2, GH3-10 0.8669296080470188 60 Smo155359 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase GLU1, FD-GOGAT, GLS1, GLUS 0.8669233666348538 61 Smo166238 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein LPA3 0.8663242526553581 78 Smo83230 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease 0.8660515086898373 63 Smo95906 Carbonic anhydrase, chloroplastic OS=Pisum sativum CA18, CA2, BETA CA2 0.8659536639918972 64 Smo141857 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor APG3 0.8657333706867901 65 Smo448213 0.8655681091283557 66 Smo62145 Solute transport.carrier-mediated transport.MFS superfamily.FPN iron-regulated metal cation transporter 0.8654326187745534 67 Smo96850 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.8642487851553396 68 Smo98333 External stimuli response.drought.stomatal closure signalling.CAS calcium sensor 0.8637328369816667 69 Smo439234 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease ARASP 0.8634784520430212 70 Smo63596 Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana 0.8634662954808426 71 Smo97903 Photosynthesis.photorespiration.glycerate kinase 0.8625388061217115 72 Smo169553 0.8620185123118098 73 Smo130316 Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana TIC55-IV, ACD1-LIKE, PTC52 0.8609524697737609 74 Smo91144 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component HCF101 0.8608725743193809 78 Smo67708 Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica 0.860019869444027 76 Smo232430 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase PDS3, PDS, PDE226 0.8581379832206354 77 Smo169778 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase APL2 0.8572541224885727 78 Smo183274 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF173 protein HCF173 0.8568244679092261 79 Smo438768 GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana 0.8563109164574381 81 Smo149815 Photosynthesis.photophosphorylation.photosystem II.photoprotection.MPH1 protein 0.8553428704489071 82 Smo121095 Coenzyme metabolism.lipoic acid synthesis.lipoate synthase LIP1 0.8535448464798172 86 Smo438522 0.8533096598668202 84 Smo270723 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component CPSRP43, CAO 0.8533041132583049 85 Smo446318 Protein OPAQUE10 OS=Zea mays 0.8525695443632207 86 Smo442777 RNA-binding protein BRN1 OS=Arabidopsis thaliana RBP-DR1, AtRBP-DR1 0.8522965563758698 87 Smo270406 Nucleotide metabolism.purines.phosphotransfers.adenylate kinase 0.8519410567607067 89 Smo266613 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase LYC 0.8511685896163078 90 Smo125882 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhM component NDH-M 0.850299610207543 91 Smo96317 Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana 0.8499336261381917 92 Smo173368 Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter NRAMP6, ATNRAMP6 0.8491124759029854 93 Smo410681 UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana AtUGT85A7, UGT85A7 0.8474781313197484 94 Smo82367 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica 0.8468705972501431 95 Smo440512 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component 0.8460050304212711 96 Smo113331 Photosynthesis.photorespiration.glycine cleavage system.H-protein lipoamide-containing component 0.8457627092181317 98 Smo88976 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter 0.8452219059532958 99 Smo10825 Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana 0.8444107065293404 100