Sequence Description Alias PCC hrr Smo166238 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein LPA3 0.9546344322628627 3 Smo448162 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana 0.951999751731973 2 Smo270566 Photosynthesis.photorespiration.serine hydroxymethyltransferase STM, SHM1, SHMT1 0.9505477781988081 3 Smo423707 0.948043202171278 5 Smo448328 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 0.9455107667631485 6 Smo235693 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.9418991910437403 8 Smo79425 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase 0.9396719250014492 7 Smo183274 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF173 protein HCF173 0.9374148306622574 8 Smo102513 Carbonic anhydrase OS=Flaveria bidentis BCA4, CA4, ATBCA4 0.9364408073068909 9 Smo270710 Photosynthesis.calvin cycle.NADPH-dependent malate dehydrogenase 0.9349503492166874 10 Smo228964 Amino acid metabolism.biosynthesis.aspartate family.asparagine.asparagine aminotransaminase AGT1, SGAT, AGT 0.9349038507589061 11 Smo91144 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component HCF101 0.9340608921389046 12 Smo145704 0.932350177030874 13 Smo431963 0.9300636916665783 14 Smo266585 Photosynthesis.photorespiration.glycolate oxidase 0.9263889845580149 15 Smo82367 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica 0.9251795334372694 16 Smo268187 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase CLA, DXS, CLA1, DEF, DXPS2 0.9214556108214976 17 Smo448213 0.9189782858673282 18 Smo227615 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136 0.9168759806323125 19 Smo182694 Photosynthesis.calvin cycle.phosphoribulokinase PRK 0.9135234961800822 20 Smo145611 Photosynthesis.photorespiration.aminotransferases.glutamate-glyoxylate transaminase GGT2, AOAT2 0.9103086165714187 23 Smo174833 Photosynthesis.calvin cycle.fructose-1,6-bisphosphatase HCEF1 0.9096368048868596 22 Smo155359 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase GLU1, FD-GOGAT, GLS1, GLUS 0.909030072666595 23 Smo98780 Monooxygenase 2 OS=Arabidopsis thaliana CTF2A 0.9083070418308793 24 Smo173339 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein ATSULA, GC1, SULA 0.9041050759073898 29 Smo62145 Solute transport.carrier-mediated transport.MFS superfamily.FPN iron-regulated metal cation transporter 0.9031277924726956 26 Smo441569 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR membrane-tethering.TROL protein TROL 0.9026589533166971 27 Smo121095 Coenzyme metabolism.lipoic acid synthesis.lipoate synthase LIP1 0.9019650541749488 28 Smo10032 Protein TSS OS=Arabidopsis thaliana 0.8985089848325549 29 Smo96351 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) UVR2, PHR1 0.8978779245781027 30 Smo166088 Photosynthesis.photophosphorylation.cytochrome b6/f complex.Rieske iron-sulfur component PetC PGR1, PETC 0.8968004889599869 31 Smo442777 RNA-binding protein BRN1 OS=Arabidopsis thaliana RBP-DR1, AtRBP-DR1 0.8912808508245642 33 Smo419766 0.8910898291980263 33 Smo90536 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class lambda 0.8894252803739051 47 Smo90782 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana 0.8885775501442403 35 Smo107634 Cytoskeleton.cp-actin-dependent plastid movement.KAC accessory motility factor KCA2, KAC2 0.886653134633961 46 Smo60716 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor emb2726 0.8864733406002021 44 Smo93338 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter 0.8862416373541109 38 Smo131912 0.8849976517993232 39 Smo268623 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase RCA 0.8849683875276043 40 Smo232430 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase PDS3, PDS, PDE226 0.8847385039288073 41 Smo228435 Photosynthesis.calvin cycle.phosphopentose epimerase RPE, EMB2728 0.8843207197991999 42 Smo177791 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase SPS1 0.884231980904288 43 Smo429956 0.8838507037969835 44 Smo426174 0.8837060164587299 45 Smo97883 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A1 activities.PC-PLA1-type phospholipase A1 0.8808006450177399 46 Smo420519 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.typical 2-Cys peroxiredoxin (2-CysPrx) 2CPB, 2-Cys Prx B 0.8804681853193866 47 Smo437924 Probable indole-3-acetic acid-amido synthetase GH3.12 OS=Oryza sativa subsp. japonica DFL2, GH3-10 0.8799639096157446 48 Smo418548 Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 OS=Arabidopsis thaliana 0.879075887100393 49 Smo96266 Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana 0.8760396037496726 50 Smo270825 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPA-2 0.8750728756066201 51 Smo271018 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component RPS1, ARRPS1 0.8745076952497344 52 Smo96850 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.8744935136106652 53 Smo424167 0.8744182136769268 54 Smo64109 0.8743174626777164 55 Smo170150 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase ATATH8 0.8741893258857495 56 Smo107811 0.8729128931029008 57 Smo109271 Phytohormones.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE family.CLE precursor protein 0.8722723380758213 58 Smo439234 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease ARASP 0.8722650788018015 59 Smo403333 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana LHCA5 0.8719932217989611 60 Smo270406 Nucleotide metabolism.purines.phosphotransfers.adenylate kinase 0.8698552976660893 61 Smo103361 0.8696003117104237 62 Smo444108 Cytoskeleton.cp-actin-dependent plastid movement.PMIR cp-actin stability co-factor 0.869502451436834 63 Smo121309 0.8694587721672183 64 Smo50862 Probable NAD kinase 2, chloroplastic OS=Oryza sativa subsp. japonica 0.8693554557343163 65 Smo266613 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase LYC 0.8675094473354015 66 Smo73285 0.8672156401720149 67 Smo445683 Nutrient uptake.copper uptake.reduction-based uptake.FRO metal ion-chelate reductase ATFRO6, FRO6 0.8672154528232736 80 Smo75562 0.8662264875159221 69 Smo144881 UDP-glucose flavonoid 3-O-glucosyltransferase 6 OS=Fragaria ananassa 0.865911221581234 72 Smo421452 0.8654674837472657 71 Smo153129 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana SSL5, YLS2 0.8643845038554749 72 Smo169254 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana MRL1 0.8637822507059587 73 Smo96442 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.NSP1-NSP2 nodulation initiation complex.NSP2 component 0.8631699743988746 74 Smo230239 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 517.3) & Probable mannitol dehydrogenase OS=Medicago sativa ATCAD9, CAD9 0.8622421516515802 75 Smo60775 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase 0.8620434437163238 76 Smo169553 0.8620298744003559 77 Smo445280 0.8614331044566366 78 Smo417198 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase PGLP1, ATPGLP1 0.8613486199128795 79 Smo78847 UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana AtUGT85A7, UGT85A7 0.860305548339862 80 Smo409044 0.8599518906594684 81 Smo107618 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CRB, HIP1.3, CSP41B 0.8598016516804806 82 Smo93150 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN8 0.8594769682973767 83 Smo442491 0.859398447320696 84 Smo173368 Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter NRAMP6, ATNRAMP6 0.8593467513500637 85 Smo148692 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor FUG1 0.8592649184170777 86 Smo230748 Carbohydrate metabolism.gluconeogenesis.pyruvate orthophosphate dikinase activity.pyruvate orthophosphate dikinase PPDK 0.8585895289234828 87 Smo14478 0.8581693732085623 88 Smo117112 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor APE1 0.8578019296479854 89 Smo272095 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component 0.857736766832577 90 Smo73323 DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana ATXRCC2, XRCC2 0.8566064347040384 91 Smo271457 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB 0.8563499405221451 93 Smo82221 Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana 0.8560182970273084 94 Smo105035 Cell cycle.organelle machineries.DNA replication.RNA primer removal.plastidial exonuclease 0.8554652589753695 95 Smo145918 Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana 0.8549318895143548 96 Smo169778 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase APL2 0.8548987028147466 97 Smo439518 Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana 0.8531211368335381 98 Smo170086 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.852033241597284 99 Smo96268 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.8501195396106834 100