Sequence Description Alias PCC hrr Smo415636 0.9290594086226552 3 Smo98591 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana 0.925872384205025 5 Smo186974 tRNA ligase 1 OS=Arabidopsis thaliana ATRNL, AtRLG1, RNL 0.9189118749556069 15 Smo121150 0.9171695661714057 10 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083 0.905811741037024 15 Smo107344 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase 0.9052171317811074 7 Smo82264 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase PPOX, HEMG1, PPO1 0.9032403756917144 7 Smo403998 0.9032166265012133 8 Smo174109 ATPase ARSA1 OS=Chlamydomonas reinhardtii 0.9030642196612858 9 Smo437596 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC7 component 0.9024524437478325 10 Smo103038 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase ATBXL2, BXL2 0.9020911838782615 11 Smo417577 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD2 0.9010900546399284 20 Smo126954 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-U motor protein 0.8992819303585214 13 Smo88014 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.8988834264564733 14 Smo442211 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase EMB2761 0.8976640575502014 74 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.8915442251721855 45 Smo104811 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor PTB2, ATPTB2 0.8911293697940136 36 Smo132867 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.bifunctional hydroxymethylpyrimidine kinase and thiamin-phosphate diphosphorylase (Th1) THIE, TH-1, TH1 0.8891182808720977 18 Smo420183 RNA biosynthesis.transcriptional activation.Trihelix transcription factor 0.8868104922736003 60 Smo71323 Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana 0.8857984470933767 20 Smo61162 Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana 0.8846319129935781 21 Smo440741 0.88230382859023 22 Smo181800 0.8822563802158797 81 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.882038166996368 35 Smo437286 0.8816794470725775 25 Smo412413 0.8812503189194564 26 Smo84012 Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana 0.8810822046500614 27 Smo153292 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.877777757617571 28 Smo172681 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase ERS, OVA3, ATERS 0.8761530465518509 51 Smo423983 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4 0.874244127206554 46 Smo76814 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic56 component 0.8737508676526797 81 Smo89990 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana 0.8734944355154939 94 Smo231453 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter ATATH6, ATH6 0.8720644509349498 33 Smo438810 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.OTP51 splicing factor 0.8719866703010701 34 Smo439080 0.8678664295040431 35 Smo90432 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8675932950766506 100 Smo86079 DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana RH39 0.8656190483452346 37 Smo109632 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.ndhA-specific mRNA splicing factor 0.8653306160578021 47 Smo417312 Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana RSY3 0.8650732241725659 81 Smo106218 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme 0.8649615237005948 73 Smo79851 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase OVA5, ATKRS-2 0.8636933906824859 96 Smo96586 0.8630808441671751 42 Smo63559 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana 0.8629546880144726 91 Smo95494 0.8617514301605936 44 Smo113974 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana 0.860695507821679 45 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.860560569266553 86 Smo90123 Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OTP84 0.8599390951022445 97 Smo418519 0.8595869485706057 49 Smo81522 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component FTSH12, EMB36, EMB156, EMB1047 0.8588800236627031 90 Smo79915 0.8580615443281407 52 Smo437676 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.8577878586171457 53 Smo45172 RNA processing.RNA modification.pseudouridylation.RsuA-type rRNA pseudouridine synthase SVR1 0.8575401594239613 54 Smo405767 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana FTSH12, EMB36, EMB156, EMB1047 0.8571422438516137 59 Smo163802 Cell wall.callose.callose synthase GLS2, ATGSL02, CALS5 0.8569098591038798 56 Smo131170 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana VAC1, ECB2, ATECB2 0.856584568640056 58 Smo440806 Chromatin organisation.histones.H1 linker histone 0.8558410071308432 59 Smo127003 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) KEA1, ATKEA1 0.8556329008467546 100 Smo146160 Solute transport.carrier-mediated transport.MC-type solute transporter SAMT1, SAMC1 0.8551430979337473 62 Smo76023 UPF0235 protein At5g63440 OS=Arabidopsis thaliana 0.8542740073569313 63 Smo440740 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase 0.8541589221274667 78 Smo445120 0.8540575784600692 65 Smo11301 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica 0.8536178631586496 97 Smo53460 Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana 0.8530141739765592 68 Smo13541 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.MBD7 ROS1-recruitment complex.IDM2/IDM3 component 0.8515723540037942 70 Smo115254 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8485433093467354 73 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8482977151914853 92 Smo164227 Putative nitric oxide synthase OS=Oryza sativa subsp. japonica ATNOA1, ATNOS1, RIF1, NOS1, NOA1 0.8480249514793753 75 Smo411435 0.847975426179696 76 Smo73828 Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana 0.8463522430277997 100 Smo412499 0.845445480025015 78 Smo118907 Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana SKL2 0.84517623118703 79 Smo46232 Cell cycle.organelle machineries.DNA replication.RNA primer removal.plastidial exonuclease 0.8428020907312236 92 Smo71251 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.8425281493331516 84 Smo85220 0.8421827082237935 85 Smo116848 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.841020965969686 86 Smo445223 Probable zinc metalloprotease EGY1, chloroplastic OS=Arabidopsis thaliana EGY1 0.8401454104520103 91 Smo405094 Elongation factor G-2, chloroplastic OS=Glycine max 0.8393337577952334 92 Smo30996 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor 0.8393166939726957 93 Smo123660 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GRP23 0.8366528350326609 95 Smo49133 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 158.5) & Cyanate hydratase OS=Physcomitrella patens subsp. patens 0.8366150921970782 96