Sequence Description Alias PCC hrr Smo417360 Pentatricopeptide repeat-containing protein At4g21880, mitochondrial OS=Arabidopsis thaliana 0.9536149346451273 1 Smo84724 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase 0.949527057382579 2 Smo229976 RNA processing.RNA modification.rRNA/tRNA methylation.rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22) 0.9437680084628601 3 Smo105080 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.other.MED34 component 0.9365345325912384 4 Smo405033 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 2 NRPA2 0.932361221160103 5 Smo123319 0.9292935216209758 8 Smo235261 tRNA wybutosine-synthesizing protein 2/3/4 OS=Arabidopsis thaliana 0.9275516320248375 11 Smo79209 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.catalytic core subcomplex.APC2 component 0.9260228910068473 9 Smo440996 DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana 0.9238412607297939 9 Smo30423 Protein degradation.peptidase families.serine-type peptidase activities.LON protease 0.9224390132263471 23 Smo74812 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor 0.9202707272164896 12 Smo100087 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB5 import karyopherin 0.9196338995539648 12 Smo74970 Chromatin organisation.histone chaperone activities.NAP-type histone chaperone 0.9195913164205105 13 Smo105046 0.9193979748944946 14 Smo164833 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component EMB2753 0.9187884290864728 27 Smo413396 0.9176499803263812 21 Smo140315 RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.9169853156154059 17 Smo168502 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamine-tRNA ligase OVA9 0.9163434268483366 18 Smo404454 0.9141409397757695 19 Smo96259 Protein ecdysoneless homolog OS=Arabidopsis thaliana 0.9140575884776695 20 Smo88373 AR401 0.9136709887885621 21 Smo98278 Protein DGS1, mitochondrial OS=Arabidopsis thaliana DGS1 0.9113800974059976 22 Smo148115 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.RRP5 assembly factor 0.9064359597473942 27 Smo41328 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana RecQl3, ATRECQ3 0.9035711591328072 24 Smo104808 DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica 0.9029573053525778 25 Smo136738 RNA biosynthesis.transcriptional activation.E2F/DP transcription factor 0.9026198955289371 26 Smo405212 EMB2777 0.9004047353908292 40 Smo110533 0.90033008747959 28 Smo439240 RNA processing.RNA modification.pseudouridylation.TruD-type tRNA pseudouridine synthase 0.8998163688565421 29 Smo183198 Nudix hydrolase 3 OS=Arabidopsis thaliana atnudt3, NUDT3 0.89792822841785 30 Smo126756 EDA7 0.896345604498041 34 Smo442069 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor 0.8958335883119243 32 Smo142045 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3a component ATTIF3A1, ATEIF3A-1, EIF3A-1, TIF3A1, EIF3A 0.8954661440952035 61 Smo175921 Chaperone protein dnaJ 13 OS=Arabidopsis thaliana OWL1 0.8943178380997244 34 Smo438217 Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana 0.8940896039636018 38 Smo419256 0.8933846998964248 47 Smo157966 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.ketol-acid reductoisomerase 0.8929410484359573 37 Smo133091 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.RSA4 assembly factor (NLE) 0.8927811470881724 38 Smo445056 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP160 scaffold nucleoporin SAR1, ATNUP160, NUP160 0.890382583330595 39 Smo439954 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.MAD1 checkpoint protein 0.8897790776201902 69 Smo407792 0.8892376374131681 41 Smo115588 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS18 component 0.8891861174245039 71 Smo153186 RNA processing.RNA modification.rRNA/tRNA methylation.TRM1 tRNA guanosine-methyltransferase 0.8887131083582909 43 Smo88024 0.8873738553088522 44 Smo180460 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana 0.8867640993945615 45 Smo21658 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG2 regulatory GTPase 0.886647519779662 72 Smo66767 Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana 0.8856069196917987 50 Smo425575 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP5 phosphatase PP5, PAPP5, PP5.2 0.88506540998885 75 Smo121407 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN carboxylase 0.8843662908543055 49 Smo402980 RNA processing.RNA modification.rRNA/tRNA methylation.TRM61-TRM6 tRNA adenosine-methyltransferase complex.TRM6 component 0.884191458751826 50 Smo145659 0.8818526151515643 68 Smo446105 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3b component EIF3B-2, ATEIF3B-2, EIF3B 0.8816408103282194 54 Smo183431 External stimuli response.drought.stomatal closure signalling.CAU1 histone methylase ATPRMT5, PRMT5, SKB1 0.8810961993788662 59 Smo439468 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpX chaperone component CLPX 0.8799424387027843 56 Smo52099 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF73-II/FEG component 0.8794716515261727 60 Smo438493 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP10 assembly factor 0.8791610877548477 58 Smo425479 RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP29/POP4 component 0.8790717264455477 59 Smo439159 Protein degradation.peptidase families.metallopeptidase activities.M3 protease 0.8786222305207255 60 Smo174931 DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana RH1, ATRH1 0.877547415617186 61 Smo173175 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3 0.8774767861516691 95 Smo166499 0.8773819142051269 63 Smo437511 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor 0.8771561504223978 64 Smo91179 Chromatin organisation.histone modifications.histone arginine methylation.PRMT4 histone methylase PRMT4B, ATPRMT4B 0.8770196168392194 65 Smo407241 0.8761150590278374 66 Smo109545 Nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase dimer.large subunit CLS8, RNR1, ATRNR1, R1 0.8756070470234211 67 Smo418586 TPR9 0.8751335120932845 68 Smo417117 Protein biosynthesis.organelle translation machineries.translation initiation.IF-3 initiation factor 0.8744542410380193 69 Smo423082 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Mpp10 assembly factor 0.8743263044227386 70 Smo441756 0.8729703575385993 72 Smo446032 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor 0.8724883683688193 74 Smo415389 0.8724544372255014 86 Smo431977 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8719703840279529 75 Smo155333 Cell cycle.interphase.DNA replication.elongation.DNA polymerase delta complex.POLD1 component EMB2780 0.8713744263337051 76 Smo267278 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component ATCSN2, CSN2, FUS12, COP12 0.871317780819502 77 Smo166978 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-epsilon 0.8711268584229667 78 Smo441094 0.8708379170148485 79 Smo419584 0.8695968311776286 81 Smo111629 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.8692136609091677 82 Smo90562 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF5 component 0.8687083447299742 83 Smo230251 Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis 0.8677544247998487 84 Smo98884 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8674096675545178 96 Smo443468 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3 0.8654505880886284 87 Smo442019 0.8652456618835725 88 Smo234317 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA chromatin transcription factor PARL1, ATNUC-L1, NUC-L1 0.8651212091611347 90 Smo95789 Protein biosynthesis.cytosolic ribosome.ribosome assembly.ribosomal protein arginine N-methyltransferase (PRMT3) PRMT3, ATPRMT3 0.8642585194719005 91 Smo418525 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase 0.862851071449822 93 Smo121195 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase 0.8627554365938646 94 Smo419387 Protein degradation.peptidase families.serine-type peptidase activities.S28 serine carboxypeptidase 0.8627216053422968 95 Smo165331 Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana 0.8619158816890308 96 Smo410403 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.PARN poly(A)-specific ribonuclease AHG2, ATPARN 0.8603462808358084 98 Smo90579 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.8603349576575599 99 Smo111896 0.8602731453280004 100