Sequence Description Alias PCC hrr Smo447716 0.9717596097000182 1 Smo84597 0.9584819169540552 2 Smo152047 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome ATPREP1, PREP1, ATZNMP 0.9554890847485868 7 Smo128787 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NYC1 component NYC1 0.9547713251008136 4 Smo425390 0.9480528842926351 5 Smo270688 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.9394103909211599 6 Smo141109 0.9370733065885104 7 Smo443419 0.93685785298973 8 Smo403442 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.9359845951111244 9 Smo418465 0.9354660241556559 10 Smo102611 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease 0.9337667681798912 11 Smo78627 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG25, ATXR7 0.932400715539281 12 Smo439181 0.9295019303391078 13 Smo150329 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana AIR3 0.9284923813296293 14 Smo84784 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.9270280539689508 15 Smo438182 0.9267836508278072 16 Smo77583 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor CHM, MSH1, ATMSH1, CHM1 0.9239853657788912 17 Smo167572 Nutrient uptake.sulfur assimilation.sulfate assimilation.(P)APS reductase ATAPR3, PRH26, PRH-26, APR3 0.9136248380953192 18 Smo98813 0.9103933913778772 19 Smo96554 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.CTP synthetase emb2742 0.908568761903434 20 Smo406591 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor 0.904517232003492 21 Smo439207 Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease 0.9009295509800109 22 Smo141010 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor COL3, ATCOL3 0.9001230782151382 23 Smo10677 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor emb1138 0.8997552150894175 27 Smo448320 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.896775036877953 34 Smo184206 Carbohydrate metabolism.starch metabolism.degradation.maltose metabolism.cytosolic alpha-glucan phosphorylase 0.8961490614157341 26 Smo170091 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase SQD2 0.8952129402271938 27 Smo12282 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8942154337164491 28 Smo444786 0.8937723454964601 29 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.893183170776108 30 Smo407040 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP8, DEG8 0.8918802808810293 31 Smo447679 Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas reinhardtii 0.8895355200203083 32 Smo99603 DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica emb1138 0.8881058235569408 33 Smo442094 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8862151592538143 34 Smo88538 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88 0.8857073975085786 35 Smo419739 0.8827651548932239 36 Smo170457 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 134.6) 0.8810815038776174 37 Smo152730 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.8805134333078461 38 Smo164116 0.8798444014773484 39 Smo143057 0.8784829538418945 40 Smo168153 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CPN60B, LEN1 0.8764199054124773 41 Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8761340728858252 53 Smo73844 0.8760084890783431 43 Smo42040 Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum 0.8746905547293558 44 Smo410507 0.8746145977140063 45 Smo413357 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.8718225974015787 46 Smo410377 0.8710287494098005 47 Smo152929 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH8 0.8704596808371926 75 Smo117919 Carbohydrate metabolism.sucrose metabolism.degradation.hexokinase ATHXK1, HXK1, GIN2 0.8698673086028043 49 Smo105805 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.868421940751337 50 Smo77541 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana 0.8679265137315241 51 Smo405512 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC17 component 0.8668376806724168 52 Smo418436 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.8652964887196464 53 Smo441564 ACD31.2, ACD32.1 0.8651620477238101 54 Smo437639 0.8645862509958521 55 Smo77276 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana 0.8642548186599667 65 Smo405784 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit B GYRB2 0.8628140164778506 57 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8618316378925127 61 Smo423505 RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor 0.8604888517061557 59 Smo442385 Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana 0.857624821880168 60 Smo416844 0.8544324819343289 68 Smo99402 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB1 component CCB1 0.8520417495268275 62 Smo441971 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component GATB 0.8513063548803258 63 Smo75478 Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana 0.8488607533905046 64 Smo180460 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana 0.8482601253949611 65 Smo140066 External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.GIGANTEA regulator protein GI, FB 0.8461167728211731 67 Smo404930 0.8459109872023441 68 Smo85032 Alpha-galactosidase 3 OS=Arabidopsis thaliana 0.8432256297978424 69 Smo442872 0.8431151366541215 99 Smo120890 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.8418280557323621 71 Smo177641 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.thiamin monophosphate phosphatase (Th2) 0.8409928464726312 72 Smo85224 0.840937120889472 73 Smo404255 Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas reinhardtii 0.8406005786371333 74 Smo430412 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8380192916936354 75 Smo172755 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IV kinase CRCK2 0.8375164386263694 76 Smo422148 Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana 0.8371363790622285 77 Smo112145 Photosynthesis.photophosphorylation.chlororespiration.PTOX terminal oxidase 0.8363392782277571 78 Smo101296 Solute transport.carrier-mediated transport.MFS superfamily.NTT ATP:ADP antiporter NTT1, ATNTT1 0.8361576574980057 79 Smo61778 0.827081405692172 81 Smo58058 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana 0.8247368730911595 82 Smo80789 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 158.0) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8238378988685905 83 Smo173093 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana 0.8233598376768236 84 Smo424841 0.8230398989194855 85 Smo90954 Coenzyme metabolism.tetrahydrofolate synthesis.dihydrofolate synthetase GLA1, EMB9, DFA, ATDFA 0.8223103884111443 87 Smo60423 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component 0.8215788143390983 88 Smo177598 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS) 0.8213548070556076 90 Smo230417 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.MPE1 component 0.8185131799790913 93 Smo438131 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana 0.815704023933618 94 Smo84550 SH2 domain-containing protein A OS=Arabidopsis thaliana STATLA, ATSHA, SHA 0.8109820722588804 96 Smo77588 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.8088336911202044 98 Smo130301 0.8077831017879641 99